Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3373 and Dsui_3374 are separated by 20 nucleotides Dsui_3374 and Dsui_3375 are separated by 143 nucleotides Dsui_3375 and Dsui_3376 are separated by 180 nucleotides Dsui_3376 and Dsui_3377 are separated by 186 nucleotides
Dsui_3373: Dsui_3373 - Na+/phosphate symporter, at 3,615,423 to 3,617,114
_3373
Dsui_3374: Dsui_3374 - cyclic nucleotide-binding protein, at 3,617,135 to 3,617,500
_3374
Dsui_3375: Dsui_3375 - hypothetical protein, at 3,617,644 to 3,617,820
_3375
Dsui_3376: Dsui_3376 - aspartate/tyrosine/aromatic aminotransferase, at 3,618,001 to 3,619,167
_3376
Dsui_3377: Dsui_3377 - Uncharacterized protein conserved in bacteria (DUF2325), at 3,619,354 to 3,620,076
_3377
Position (kb)
3618
3619
3620 Strain fitness (log2 ratio)
-2
-1
0
1 at 3617.150 kb on - strand at 3617.208 kb on + strand, within Dsui_3374 at 3617.208 kb on + strand, within Dsui_3374 at 3617.247 kb on - strand at 3617.335 kb on + strand, within Dsui_3374 at 3617.354 kb on + strand, within Dsui_3374 at 3617.367 kb on + strand, within Dsui_3374 at 3617.428 kb on - strand at 3617.531 kb on + strand at 3617.769 kb on - strand, within Dsui_3375 at 3618.125 kb on - strand, within Dsui_3376 at 3618.187 kb on - strand, within Dsui_3376 at 3618.207 kb on + strand at 3618.345 kb on - strand, within Dsui_3376 at 3618.358 kb on + strand at 3618.382 kb on + strand at 3618.384 kb on + strand at 3618.509 kb on - strand, within Dsui_3376 at 3618.724 kb on - strand, within Dsui_3376 at 3618.798 kb on - strand, within Dsui_3376 at 3618.798 kb on - strand, within Dsui_3376 at 3618.882 kb on + strand, within Dsui_3376 at 3618.916 kb on + strand, within Dsui_3376 at 3618.944 kb on + strand at 3618.984 kb on + strand, within Dsui_3376 at 3619.034 kb on - strand, within Dsui_3376 at 3619.034 kb on - strand, within Dsui_3376 at 3619.065 kb on + strand at 3619.124 kb on + strand at 3619.126 kb on - strand at 3619.132 kb on - strand at 3619.209 kb on - strand at 3619.278 kb on + strand at 3619.489 kb on - strand, within Dsui_3377 at 3619.532 kb on - strand, within Dsui_3377 at 3619.575 kb on - strand, within Dsui_3377 at 3619.633 kb on - strand, within Dsui_3377 at 3619.704 kb on - strand, within Dsui_3377 at 3619.772 kb on - strand at 3620.082 kb on + strand at 3620.095 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 3,617,150 - -2.6 3,617,208 + Dsui_3374 0.20 -1.9 3,617,208 + Dsui_3374 0.20 +0.9 3,617,247 - +0.9 3,617,335 + Dsui_3374 0.55 +0.9 3,617,354 + Dsui_3374 0.60 -2.6 3,617,367 + Dsui_3374 0.63 -0.6 3,617,428 - +0.9 3,617,531 + -0.1 3,617,769 - Dsui_3375 0.71 -1.6 3,618,125 - Dsui_3376 0.11 -0.3 3,618,187 - Dsui_3376 0.16 +0.2 3,618,207 + +0.9 3,618,345 - Dsui_3376 0.29 -0.2 3,618,358 + +0.9 3,618,382 + +0.9 3,618,384 + +0.9 3,618,509 - Dsui_3376 0.44 -0.6 3,618,724 - Dsui_3376 0.62 -0.1 3,618,798 - Dsui_3376 0.68 +1.1 3,618,798 - Dsui_3376 0.68 -0.1 3,618,882 + Dsui_3376 0.75 -0.7 3,618,916 + Dsui_3376 0.78 -0.1 3,618,944 + +0.9 3,618,984 + Dsui_3376 0.84 -1.1 3,619,034 - Dsui_3376 0.89 -0.9 3,619,034 - Dsui_3376 0.89 -1.7 3,619,065 + -1.7 3,619,124 + +0.9 3,619,126 - -1.8 3,619,132 - -1.1 3,619,209 - -0.7 3,619,278 + +0.9 3,619,489 - Dsui_3377 0.19 -0.7 3,619,532 - Dsui_3377 0.25 -1.7 3,619,575 - Dsui_3377 0.31 +0.9 3,619,633 - Dsui_3377 0.39 -0.7 3,619,704 - Dsui_3377 0.48 -1.9 3,619,772 - +0.9 3,620,082 + -2.3 3,620,095 - +0.9
Or see this region's nucleotide sequence