Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3135 and Dsui_3136 are separated by 47 nucleotides Dsui_3136 and Dsui_3137 are separated by 89 nucleotides Dsui_3137 and Dsui_3138 are separated by 83 nucleotides
Dsui_3135: Dsui_3135 - HflK protein, at 3,356,912 to 3,358,186
_3135
Dsui_3136: Dsui_3136 - GTP-binding protein HflX, at 3,358,234 to 3,359,421
_3136
Dsui_3137: Dsui_3137 - RNA chaperone Hfq, at 3,359,511 to 3,359,750
_3137
Dsui_3138: Dsui_3138 - ribosome-associated GTPase EngA, at 3,359,834 to 3,361,219
_3138
Position (kb)
3358
3359
3360 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 3357.422 kb on - strand, within Dsui_3135 at 3358.204 kb on - strand at 3358.394 kb on + strand, within Dsui_3136 at 3358.501 kb on + strand at 3358.538 kb on - strand, within Dsui_3136 at 3358.592 kb on - strand, within Dsui_3136 at 3358.647 kb on + strand, within Dsui_3136 at 3358.812 kb on - strand, within Dsui_3136 at 3358.883 kb on - strand, within Dsui_3136 at 3358.915 kb on - strand, within Dsui_3136 at 3358.979 kb on + strand, within Dsui_3136 at 3358.990 kb on + strand, within Dsui_3136 at 3359.115 kb on - strand, within Dsui_3136 at 3359.119 kb on - strand, within Dsui_3136 at 3359.125 kb on - strand, within Dsui_3136 at 3359.151 kb on + strand, within Dsui_3136 at 3359.249 kb on - strand, within Dsui_3136 at 3359.280 kb on - strand, within Dsui_3136 at 3359.299 kb on + strand, within Dsui_3136 at 3359.333 kb on + strand at 3359.333 kb on + strand at 3359.367 kb on - strand at 3359.367 kb on - strand at 3359.367 kb on - strand at 3359.532 kb on - strand at 3359.753 kb on - strand at 3359.826 kb on - strand at 3359.901 kb on - strand at 3359.901 kb on - strand at 3359.901 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 3,357,422 - Dsui_3135 0.40 -0.1 3,358,204 - -1.2 3,358,394 + Dsui_3136 0.13 -0.7 3,358,501 + -0.7 3,358,538 - Dsui_3136 0.26 -1.6 3,358,592 - Dsui_3136 0.30 -3.3 3,358,647 + Dsui_3136 0.35 +0.9 3,358,812 - Dsui_3136 0.49 -2.0 3,358,883 - Dsui_3136 0.55 -2.4 3,358,915 - Dsui_3136 0.57 -3.4 3,358,979 + Dsui_3136 0.63 +0.9 3,358,990 + Dsui_3136 0.64 +0.9 3,359,115 - Dsui_3136 0.74 -2.6 3,359,119 - Dsui_3136 0.74 -2.7 3,359,125 - Dsui_3136 0.75 -2.9 3,359,151 + Dsui_3136 0.77 -2.6 3,359,249 - Dsui_3136 0.85 -5.8 3,359,280 - Dsui_3136 0.88 -2.3 3,359,299 + Dsui_3136 0.90 -0.1 3,359,333 + -0.7 3,359,333 + -0.1 3,359,367 - -2.1 3,359,367 - -1.7 3,359,367 - -2.7 3,359,532 - -2.9 3,359,753 - -4.2 3,359,826 - -0.7 3,359,901 - -0.8 3,359,901 - -1.0 3,359,901 - -0.8
Or see this region's nucleotide sequence