Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3070 and Dsui_3071 overlap by 70 nucleotides Dsui_3071 and Dsui_3072 are separated by 97 nucleotides Dsui_3072 and Dsui_3073 are separated by 3 nucleotides
Dsui_3070: Dsui_3070 - periplasmic component of amino acid ABC-type transporter/signal transduction system, at 3,285,402 to 3,286,253
_3070
Dsui_3071: Dsui_3071 - SprA-related family, at 3,286,184 to 3,286,972
_3071
Dsui_3072: Dsui_3072 - DNA repair protein RecN, at 3,287,070 to 3,288,725
_3072
Dsui_3073: Dsui_3073 - putative sugar kinase, at 3,288,729 to 3,289,607
_3073
Position (kb)
3287
3288
3289 Strain fitness (log2 ratio)
-2
-1
0
1 at 3286.342 kb on + strand, within Dsui_3071 at 3286.351 kb on + strand, within Dsui_3071 at 3286.376 kb on - strand, within Dsui_3071 at 3286.497 kb on - strand, within Dsui_3071 at 3286.518 kb on + strand, within Dsui_3071 at 3286.592 kb on - strand, within Dsui_3071 at 3286.640 kb on - strand, within Dsui_3071 at 3286.640 kb on - strand, within Dsui_3071 at 3286.665 kb on + strand, within Dsui_3071 at 3286.684 kb on + strand at 3286.776 kb on - strand, within Dsui_3071 at 3286.988 kb on - strand at 3287.299 kb on + strand at 3287.446 kb on + strand at 3287.922 kb on - strand, within Dsui_3072 at 3287.950 kb on - strand, within Dsui_3072 at 3287.986 kb on + strand at 3287.999 kb on - strand, within Dsui_3072 at 3288.130 kb on + strand at 3288.406 kb on + strand, within Dsui_3072 at 3288.517 kb on - strand, within Dsui_3072 at 3288.544 kb on - strand, within Dsui_3072 at 3288.727 kb on + strand at 3288.735 kb on - strand at 3289.636 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 3,286,342 + Dsui_3071 0.20 -1.6 3,286,351 + Dsui_3071 0.21 -1.6 3,286,376 - Dsui_3071 0.24 -0.8 3,286,497 - Dsui_3071 0.40 -0.4 3,286,518 + Dsui_3071 0.42 -0.2 3,286,592 - Dsui_3071 0.52 -0.9 3,286,640 - Dsui_3071 0.58 -1.0 3,286,640 - Dsui_3071 0.58 -0.9 3,286,665 + Dsui_3071 0.61 -0.2 3,286,684 + -0.2 3,286,776 - Dsui_3071 0.75 -0.3 3,286,988 - -1.8 3,287,299 + -0.2 3,287,446 + +0.8 3,287,922 - Dsui_3072 0.51 -1.2 3,287,950 - Dsui_3072 0.53 -1.4 3,287,986 + +0.8 3,287,999 - Dsui_3072 0.56 -0.3 3,288,130 + -0.7 3,288,406 + Dsui_3072 0.81 -0.2 3,288,517 - Dsui_3072 0.87 -1.4 3,288,544 - Dsui_3072 0.89 -1.2 3,288,727 + +0.8 3,288,735 - -1.4 3,289,636 - -1.4
Or see this region's nucleotide sequence