Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2750 and Dsui_2751 are separated by 76 nucleotides Dsui_2751 and Dsui_2752 are separated by 300 nucleotides
Dsui_2750: Dsui_2750 - cyanophycin synthetase, at 2,905,615 to 2,908,200
_2750
Dsui_2751: Dsui_2751 - cyanophycin synthetase, at 2,908,277 to 2,910,445
_2751
Dsui_2752: Dsui_2752 - ABC-type multidrug transport system, ATPase and permease component, at 2,910,746 to 2,912,953
_2752
Position (kb)
2908
2909
2910
2911 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2907.428 kb on + strand, within Dsui_2750 at 2907.572 kb on + strand, within Dsui_2750 at 2907.572 kb on + strand, within Dsui_2750 at 2907.663 kb on + strand, within Dsui_2750 at 2907.668 kb on + strand at 2907.671 kb on - strand, within Dsui_2750 at 2907.671 kb on - strand, within Dsui_2750 at 2907.703 kb on - strand, within Dsui_2750 at 2907.786 kb on - strand, within Dsui_2750 at 2907.811 kb on + strand at 2907.902 kb on - strand, within Dsui_2750 at 2907.921 kb on - strand, within Dsui_2750 at 2907.964 kb on + strand at 2908.169 kb on - strand at 2908.169 kb on - strand at 2908.184 kb on - strand at 2908.244 kb on + strand at 2908.295 kb on + strand at 2908.303 kb on - strand at 2908.357 kb on - strand at 2908.466 kb on + strand at 2908.532 kb on - strand, within Dsui_2751 at 2908.662 kb on + strand at 2908.672 kb on - strand, within Dsui_2751 at 2908.866 kb on + strand, within Dsui_2751 at 2908.874 kb on - strand, within Dsui_2751 at 2908.896 kb on - strand, within Dsui_2751 at 2909.048 kb on - strand, within Dsui_2751 at 2909.060 kb on - strand, within Dsui_2751 at 2909.156 kb on - strand, within Dsui_2751 at 2909.156 kb on - strand, within Dsui_2751 at 2909.168 kb on - strand, within Dsui_2751 at 2909.181 kb on - strand, within Dsui_2751 at 2909.574 kb on + strand at 2909.619 kb on - strand, within Dsui_2751 at 2909.619 kb on - strand, within Dsui_2751 at 2909.886 kb on + strand at 2909.953 kb on + strand at 2910.063 kb on - strand, within Dsui_2751 at 2910.098 kb on - strand, within Dsui_2751 at 2910.183 kb on - strand, within Dsui_2751 at 2910.258 kb on - strand at 2910.286 kb on + strand at 2910.294 kb on - strand at 2910.392 kb on - strand at 2910.392 kb on - strand at 2910.407 kb on - strand at 2910.414 kb on - strand at 2910.448 kb on - strand at 2910.449 kb on - strand at 2910.488 kb on - strand at 2910.488 kb on - strand at 2910.488 kb on - strand at 2910.488 kb on - strand at 2910.547 kb on + strand at 2910.555 kb on - strand at 2910.555 kb on - strand at 2910.555 kb on - strand at 2910.573 kb on + strand at 2910.581 kb on - strand at 2910.589 kb on + strand at 2910.589 kb on + strand at 2910.597 kb on - strand at 2910.651 kb on + strand at 2910.651 kb on + strand at 2911.316 kb on + strand, within Dsui_2752 at 2911.414 kb on + strand, within Dsui_2752
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 2,907,428 + Dsui_2750 0.70 +0.6 2,907,572 + Dsui_2750 0.76 -1.7 2,907,572 + Dsui_2750 0.76 -0.4 2,907,663 + Dsui_2750 0.79 +0.6 2,907,668 + +0.6 2,907,671 - Dsui_2750 0.80 -2.2 2,907,671 - Dsui_2750 0.80 -1.4 2,907,703 - Dsui_2750 0.81 -1.9 2,907,786 - Dsui_2750 0.84 -3.4 2,907,811 + +0.6 2,907,902 - Dsui_2750 0.88 -2.4 2,907,921 - Dsui_2750 0.89 -2.2 2,907,964 + -0.4 2,908,169 - -1.5 2,908,169 - -6.0 2,908,184 - -3.3 2,908,244 + +0.6 2,908,295 + +0.6 2,908,303 - -1.7 2,908,357 - -1.0 2,908,466 + +0.6 2,908,532 - Dsui_2751 0.12 -3.2 2,908,662 + +0.6 2,908,672 - Dsui_2751 0.18 -2.1 2,908,866 + Dsui_2751 0.27 -1.0 2,908,874 - Dsui_2751 0.28 -2.5 2,908,896 - Dsui_2751 0.29 -1.8 2,909,048 - Dsui_2751 0.36 -2.0 2,909,060 - Dsui_2751 0.36 -3.4 2,909,156 - Dsui_2751 0.41 -2.3 2,909,156 - Dsui_2751 0.41 -1.5 2,909,168 - Dsui_2751 0.41 -2.0 2,909,181 - Dsui_2751 0.42 -3.0 2,909,574 + +0.6 2,909,619 - Dsui_2751 0.62 -2.5 2,909,619 - Dsui_2751 0.62 -1.7 2,909,886 + +0.6 2,909,953 + +0.6 2,910,063 - Dsui_2751 0.82 -2.0 2,910,098 - Dsui_2751 0.84 -2.1 2,910,183 - Dsui_2751 0.88 -1.2 2,910,258 - -1.4 2,910,286 + -0.4 2,910,294 - -1.4 2,910,392 - -3.8 2,910,392 - -3.6 2,910,407 - -2.4 2,910,414 - -3.0 2,910,448 - -2.2 2,910,449 - -0.8 2,910,488 - +1.6 2,910,488 - -3.0 2,910,488 - -2.4 2,910,488 - -1.4 2,910,547 + -2.1 2,910,555 - -4.1 2,910,555 - +0.8 2,910,555 - -1.0 2,910,573 + -2.2 2,910,581 - +0.6 2,910,589 + -3.7 2,910,589 + -2.6 2,910,597 - +0.6 2,910,651 + -0.9 2,910,651 + -1.9 2,911,316 + Dsui_2752 0.26 -2.8 2,911,414 + Dsui_2752 0.30 -0.9
Or see this region's nucleotide sequence