Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2732 and Dsui_2733 are separated by 56 nucleotides Dsui_2733 and Dsui_2734 are separated by 137 nucleotides Dsui_2734 and Dsui_2735 are separated by 576 nucleotides
Dsui_2732: Dsui_2732 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 2,887,207 to 2,888,073
_2732
Dsui_2733: Dsui_2733 - bacterioferritin, at 2,888,130 to 2,888,603
_2733
Dsui_2734: Dsui_2734 - bacterioferritin-associated ferredoxin, at 2,888,741 to 2,888,947
_2734
Dsui_2735: Dsui_2735 - glycine cleavage system T protein, at 2,889,524 to 2,890,615
_2735
Position (kb)
2888
2889 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2887.131 kb on - strand at 2887.149 kb on + strand at 2887.149 kb on + strand at 2887.501 kb on - strand, within Dsui_2732 at 2887.516 kb on - strand, within Dsui_2732 at 2887.555 kb on - strand, within Dsui_2732 at 2887.572 kb on - strand at 2887.614 kb on - strand, within Dsui_2732 at 2887.677 kb on - strand, within Dsui_2732 at 2887.706 kb on - strand, within Dsui_2732 at 2887.926 kb on - strand, within Dsui_2732 at 2888.030 kb on - strand at 2888.101 kb on + strand at 2888.314 kb on - strand, within Dsui_2733 at 2888.405 kb on - strand, within Dsui_2733 at 2888.444 kb on + strand, within Dsui_2733 at 2888.698 kb on - strand at 2888.815 kb on + strand, within Dsui_2734 at 2888.856 kb on - strand, within Dsui_2734 at 2888.856 kb on - strand, within Dsui_2734 at 2888.947 kb on - strand at 2888.964 kb on - strand at 2888.964 kb on - strand at 2889.161 kb on + strand at 2889.228 kb on + strand at 2889.310 kb on + strand at 2889.312 kb on + strand at 2889.377 kb on + strand at 2889.377 kb on + strand at 2889.408 kb on + strand at 2889.421 kb on + strand at 2889.422 kb on - strand at 2889.563 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 2,887,131 - -0.4 2,887,149 + -1.4 2,887,149 + +0.6 2,887,501 - Dsui_2732 0.34 -1.4 2,887,516 - Dsui_2732 0.36 -0.4 2,887,555 - Dsui_2732 0.40 -1.0 2,887,572 - +0.6 2,887,614 - Dsui_2732 0.47 -2.2 2,887,677 - Dsui_2732 0.54 -0.4 2,887,706 - Dsui_2732 0.58 -1.0 2,887,926 - Dsui_2732 0.83 -1.7 2,888,030 - -0.4 2,888,101 + -0.4 2,888,314 - Dsui_2733 0.39 -2.1 2,888,405 - Dsui_2733 0.58 -3.1 2,888,444 + Dsui_2733 0.66 +0.6 2,888,698 - -1.6 2,888,815 + Dsui_2734 0.36 +0.6 2,888,856 - Dsui_2734 0.56 -1.5 2,888,856 - Dsui_2734 0.56 -2.3 2,888,947 - -1.3 2,888,964 - -1.3 2,888,964 - -0.8 2,889,161 + -1.4 2,889,228 + -0.7 2,889,310 + -0.8 2,889,312 + -0.8 2,889,377 + -1.4 2,889,377 + -0.8 2,889,408 + -1.5 2,889,421 + -1.2 2,889,422 - +0.6 2,889,563 + -0.8
Or see this region's nucleotide sequence