Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2668 and Dsui_2669 are separated by 115 nucleotides Dsui_2669 and Dsui_2670 are separated by 89 nucleotides Dsui_2670 and Dsui_2671 are separated by 97 nucleotides
Dsui_2668: Dsui_2668 - putative phosphatase, at 2,819,444 to 2,821,390
_2668
Dsui_2669: Dsui_2669 - ankyrin repeat-containing protein, at 2,821,506 to 2,822,252
_2669
Dsui_2670: Dsui_2670 - GMP synthase (glutamine-hydrolyzing), at 2,822,342 to 2,823,976
_2670
Dsui_2671: Dsui_2671 - inosine-5''-monophosphate dehydrogenase, at 2,824,074 to 2,825,534
_2671
Position (kb)
2822
2823
2824 Strain fitness (log2 ratio)
-2
-1
0
1 at 2821.546 kb on + strand at 2821.638 kb on - strand at 2821.655 kb on + strand, within Dsui_2669 at 2821.824 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.893 kb on - strand, within Dsui_2669 at 2821.924 kb on + strand, within Dsui_2669 at 2821.924 kb on + strand, within Dsui_2669 at 2821.924 kb on + strand, within Dsui_2669 at 2821.929 kb on + strand, within Dsui_2669 at 2822.075 kb on - strand at 2822.135 kb on - strand, within Dsui_2669 at 2822.135 kb on - strand, within Dsui_2669 at 2822.185 kb on - strand at 2822.241 kb on + strand at 2822.303 kb on + strand at 2822.311 kb on - strand at 2822.311 kb on - strand at 2824.038 kb on + strand at 2824.038 kb on + strand at 2824.038 kb on + strand at 2824.038 kb on + strand at 2824.046 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 2,821,546 + -2.6 2,821,638 - +0.5 2,821,655 + Dsui_2669 0.20 +0.5 2,821,824 + Dsui_2669 0.43 -2.3 2,821,831 + Dsui_2669 0.44 -2.6 2,821,831 + Dsui_2669 0.44 -1.5 2,821,831 + Dsui_2669 0.44 -1.5 2,821,831 + Dsui_2669 0.44 -0.2 2,821,893 - Dsui_2669 0.52 -0.5 2,821,924 + Dsui_2669 0.56 -1.0 2,821,924 + Dsui_2669 0.56 -2.5 2,821,924 + Dsui_2669 0.56 -1.8 2,821,929 + Dsui_2669 0.57 -0.5 2,822,075 - +0.5 2,822,135 - Dsui_2669 0.84 -0.5 2,822,135 - Dsui_2669 0.84 -0.5 2,822,185 - +0.5 2,822,241 + -1.3 2,822,303 + +0.5 2,822,311 - -1.0 2,822,311 - -0.1 2,824,038 + +0.5 2,824,038 + -1.0 2,824,038 + -0.5 2,824,038 + +0.5 2,824,046 - -0.7
Or see this region's nucleotide sequence