Strain Fitness in Dechlorosoma suillum PS around Dsui_2541

Experiment: ALP with copper (II) chloride 0.6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2540 and Dsui_2541 overlap by 4 nucleotidesDsui_2541 and Dsui_2542 overlap by 4 nucleotides Dsui_2540: Dsui_2540 - ribosomal protein S12 methylthiotransferase RimO, at 2,691,556 to 2,692,899 _2540 Dsui_2541: Dsui_2541 - putative esterase of the alpha-beta hydrolase superfamily, at 2,692,896 to 2,693,765 _2541 Dsui_2542: Dsui_2542 - FAD/FMN-dependent dehydrogenase, at 2,693,762 to 2,695,168 _2542 Position (kb) 2692 2693 2694Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 2692.216 kb on + strand, within Dsui_2540at 2692.311 kb on + strand, within Dsui_2540at 2692.863 kb on - strandat 2692.878 kb on + strandat 2692.909 kb on - strandat 2692.948 kb on - strandat 2693.131 kb on - strand, within Dsui_2541at 2693.138 kb on + strand, within Dsui_2541at 2693.227 kb on + strand, within Dsui_2541at 2693.227 kb on + strand, within Dsui_2541at 2693.242 kb on - strand, within Dsui_2541at 2693.258 kb on + strand, within Dsui_2541at 2693.363 kb on + strand, within Dsui_2541at 2693.363 kb on + strand, within Dsui_2541at 2693.368 kb on + strand, within Dsui_2541at 2693.377 kb on + strand, within Dsui_2541at 2693.387 kb on + strand, within Dsui_2541at 2693.461 kb on + strand, within Dsui_2541at 2693.622 kb on + strand, within Dsui_2541at 2693.698 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM
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2,692,216 + Dsui_2540 0.49 -2.3
2,692,311 + Dsui_2540 0.56 -5.2
2,692,863 - +0.6
2,692,878 + -3.1
2,692,909 - +0.6
2,692,948 - -1.4
2,693,131 - Dsui_2541 0.27 -2.0
2,693,138 + Dsui_2541 0.28 -1.9
2,693,227 + Dsui_2541 0.38 -1.9
2,693,227 + Dsui_2541 0.38 -2.1
2,693,242 - Dsui_2541 0.40 +0.6
2,693,258 + Dsui_2541 0.42 -3.3
2,693,363 + Dsui_2541 0.54 -5.8
2,693,363 + Dsui_2541 0.54 -1.7
2,693,368 + Dsui_2541 0.54 -4.8
2,693,377 + Dsui_2541 0.55 -4.8
2,693,387 + Dsui_2541 0.56 -2.3
2,693,461 + Dsui_2541 0.65 -5.0
2,693,622 + Dsui_2541 0.83 -3.3
2,693,698 - -0.4

Or see this region's nucleotide sequence