Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2166 and Dsui_2167 are separated by 101 nucleotides Dsui_2167 and Dsui_2168 are separated by 61 nucleotides
Dsui_2166: Dsui_2166 - Fe2+-dicitrate sensor, membrane component, at 2,301,735 to 2,302,670
_2166
Dsui_2167: Dsui_2167 - TonB-dependent siderophore receptor, at 2,302,772 to 2,305,192
_2167
Dsui_2168: Dsui_2168 - putative hydrolase of alpha/beta superfamily, at 2,305,254 to 2,306,219
_2168
Position (kb)
2302
2303
2304
2305
2306 Strain fitness (log2 ratio)
-2
-1
0
1 at 2301.906 kb on + strand, within Dsui_2166 at 2301.931 kb on + strand, within Dsui_2166 at 2301.939 kb on - strand at 2301.939 kb on - strand at 2302.360 kb on + strand, within Dsui_2166 at 2302.431 kb on + strand at 2302.586 kb on + strand at 2302.622 kb on - strand at 2302.648 kb on + strand at 2302.666 kb on + strand at 2302.774 kb on + strand at 2302.782 kb on - strand at 2302.782 kb on - strand at 2302.832 kb on + strand at 2302.928 kb on + strand at 2303.099 kb on + strand, within Dsui_2167 at 2303.100 kb on + strand, within Dsui_2167 at 2303.264 kb on + strand, within Dsui_2167 at 2303.411 kb on + strand at 2303.418 kb on + strand at 2303.456 kb on + strand, within Dsui_2167 at 2303.499 kb on - strand at 2303.555 kb on + strand, within Dsui_2167 at 2303.602 kb on - strand at 2303.609 kb on + strand, within Dsui_2167 at 2303.646 kb on + strand, within Dsui_2167 at 2303.789 kb on + strand, within Dsui_2167 at 2303.944 kb on - strand at 2303.996 kb on + strand, within Dsui_2167 at 2304.154 kb on + strand at 2304.195 kb on + strand, within Dsui_2167 at 2304.195 kb on + strand at 2304.203 kb on - strand at 2304.203 kb on - strand at 2304.341 kb on - strand at 2304.358 kb on - strand at 2304.360 kb on - strand, within Dsui_2167 at 2304.384 kb on + strand, within Dsui_2167 at 2304.391 kb on - strand at 2304.515 kb on + strand at 2304.555 kb on - strand at 2304.555 kb on - strand at 2304.615 kb on - strand at 2304.685 kb on + strand at 2304.894 kb on + strand at 2304.900 kb on - strand at 2304.921 kb on + strand at 2304.923 kb on - strand at 2305.022 kb on - strand at 2305.107 kb on - strand at 2305.161 kb on + strand at 2305.191 kb on - strand at 2305.388 kb on + strand at 2305.596 kb on - strand at 2305.687 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 2,301,906 + Dsui_2166 0.18 -0.7 2,301,931 + Dsui_2166 0.21 -1.5 2,301,939 - -0.7 2,301,939 - +0.8 2,302,360 + Dsui_2166 0.67 -2.4 2,302,431 + +0.8 2,302,586 + -1.5 2,302,622 - +0.8 2,302,648 + -2.0 2,302,666 + +0.8 2,302,774 + -0.2 2,302,782 - -0.8 2,302,782 - -0.7 2,302,832 + -2.0 2,302,928 + -0.7 2,303,099 + Dsui_2167 0.14 -2.0 2,303,100 + Dsui_2167 0.14 +0.8 2,303,264 + Dsui_2167 0.20 +0.8 2,303,411 + +0.8 2,303,418 + +0.8 2,303,456 + Dsui_2167 0.28 -0.2 2,303,499 - -0.2 2,303,555 + Dsui_2167 0.32 +0.8 2,303,602 - -0.2 2,303,609 + Dsui_2167 0.35 +0.8 2,303,646 + Dsui_2167 0.36 +0.8 2,303,789 + Dsui_2167 0.42 -1.7 2,303,944 - +0.8 2,303,996 + Dsui_2167 0.51 -0.7 2,304,154 + +0.8 2,304,195 + Dsui_2167 0.59 +0.8 2,304,195 + -1.2 2,304,203 - -2.0 2,304,203 - -0.7 2,304,341 - +0.8 2,304,358 - +0.8 2,304,360 - Dsui_2167 0.66 -2.0 2,304,384 + Dsui_2167 0.67 -0.2 2,304,391 - -0.7 2,304,515 + -1.2 2,304,555 - -0.2 2,304,555 - +0.8 2,304,615 - -0.7 2,304,685 + +0.8 2,304,894 + -0.7 2,304,900 - -0.7 2,304,921 + -0.2 2,304,923 - -1.2 2,305,022 - +0.8 2,305,107 - +0.8 2,305,161 + -0.7 2,305,191 - -0.7 2,305,388 + +0.8 2,305,596 - +0.8 2,305,687 - -0.2
Or see this region's nucleotide sequence