Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2066 and Dsui_2067 are separated by 250 nucleotides Dsui_2067 and Dsui_2068 overlap by 8 nucleotides Dsui_2068 and Dsui_2069 are separated by 294 nucleotides
Dsui_2066: Dsui_2066 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 2,184,345 to 2,185,148
_2066
Dsui_2067: Dsui_2067 - ABC-type metal ion transport system, permease component, at 2,185,399 to 2,186,097
_2067
Dsui_2068: Dsui_2068 - ABC-type metal ion transport system, ATPase component, at 2,186,090 to 2,186,926
_2068
Dsui_2069: Dsui_2069 - acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, at 2,187,221 to 2,188,810
_2069
Position (kb)
2186
2187 Strain fitness (log2 ratio)
-2
-1
0
1 at 2185.135 kb on - strand at 2185.168 kb on - strand at 2185.168 kb on - strand at 2185.168 kb on - strand at 2185.223 kb on - strand at 2185.345 kb on + strand at 2185.389 kb on + strand at 2185.397 kb on - strand at 2185.419 kb on + strand at 2185.574 kb on - strand, within Dsui_2067 at 2185.579 kb on - strand, within Dsui_2067 at 2185.657 kb on + strand, within Dsui_2067 at 2185.673 kb on + strand, within Dsui_2067 at 2185.725 kb on + strand, within Dsui_2067 at 2185.920 kb on - strand, within Dsui_2067 at 2185.925 kb on - strand, within Dsui_2067 at 2185.931 kb on - strand, within Dsui_2067 at 2185.941 kb on - strand, within Dsui_2067 at 2186.092 kb on + strand at 2186.275 kb on + strand, within Dsui_2068 at 2186.433 kb on - strand, within Dsui_2068 at 2186.532 kb on + strand, within Dsui_2068 at 2186.640 kb on - strand, within Dsui_2068 at 2186.703 kb on - strand, within Dsui_2068 at 2186.733 kb on + strand, within Dsui_2068 at 2186.838 kb on + strand at 2186.853 kb on - strand at 2186.853 kb on - strand at 2186.949 kb on - strand at 2186.949 kb on - strand at 2186.949 kb on - strand at 2186.951 kb on - strand at 2186.959 kb on - strand at 2187.041 kb on - strand at 2187.065 kb on - strand at 2187.226 kb on - strand at 2187.355 kb on - strand at 2187.375 kb on - strand at 2187.375 kb on - strand at 2187.417 kb on - strand, within Dsui_2069 at 2187.484 kb on - strand, within Dsui_2069 at 2187.610 kb on - strand, within Dsui_2069 at 2187.710 kb on + strand at 2187.729 kb on + strand at 2187.755 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 2,185,135 - +0.9 2,185,168 - +0.4 2,185,168 - +0.8 2,185,168 - +0.9 2,185,223 - -1.0 2,185,345 + +0.9 2,185,389 + -0.7 2,185,397 - -0.8 2,185,419 + -1.1 2,185,574 - Dsui_2067 0.25 +1.1 2,185,579 - Dsui_2067 0.26 +1.1 2,185,657 + Dsui_2067 0.37 -2.1 2,185,673 + Dsui_2067 0.39 -1.1 2,185,725 + Dsui_2067 0.47 -0.1 2,185,920 - Dsui_2067 0.75 +1.6 2,185,925 - Dsui_2067 0.75 +1.3 2,185,931 - Dsui_2067 0.76 +1.4 2,185,941 - Dsui_2067 0.78 +1.4 2,186,092 + +0.9 2,186,275 + Dsui_2068 0.22 -0.7 2,186,433 - Dsui_2068 0.41 +1.3 2,186,532 + Dsui_2068 0.53 +0.9 2,186,640 - Dsui_2068 0.66 +1.2 2,186,703 - Dsui_2068 0.73 +1.3 2,186,733 + Dsui_2068 0.77 -1.4 2,186,838 + +0.9 2,186,853 - +1.3 2,186,853 - +0.9 2,186,949 - +0.6 2,186,949 - -0.9 2,186,949 - -1.1 2,186,951 - -0.7 2,186,959 - -0.6 2,187,041 - -0.5 2,187,065 - -1.6 2,187,226 - +0.9 2,187,355 - +0.2 2,187,375 - -0.1 2,187,375 - -2.7 2,187,417 - Dsui_2069 0.12 +0.9 2,187,484 - Dsui_2069 0.17 -0.3 2,187,610 - Dsui_2069 0.24 -0.9 2,187,710 + +0.9 2,187,729 + -0.7 2,187,755 + +0.9
Or see this region's nucleotide sequence