Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1976 and Dsui_1977 are separated by 109 nucleotides Dsui_1977 and Dsui_1978 are separated by 13 nucleotides
Dsui_1976: Dsui_1976 - deacetylase, histone deacetylase/acetoin utilization protein, at 2,084,942 to 2,085,868
_1976
Dsui_1977: Dsui_1977 - dihydrodipicolinate synthase, at 2,085,978 to 2,086,856
_1977
Dsui_1978: Dsui_1978 - putative lipoprotein, at 2,086,870 to 2,088,003
_1978
Position (kb)
2085
2086
2087 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2085.048 kb on + strand, within Dsui_1976 at 2085.099 kb on + strand, within Dsui_1976 at 2085.099 kb on + strand, within Dsui_1976 at 2085.099 kb on + strand, within Dsui_1976 at 2085.135 kb on + strand, within Dsui_1976 at 2085.143 kb on - strand at 2085.221 kb on - strand at 2085.262 kb on - strand at 2085.344 kb on + strand, within Dsui_1976 at 2085.344 kb on + strand, within Dsui_1976 at 2085.474 kb on + strand, within Dsui_1976 at 2085.485 kb on + strand, within Dsui_1976 at 2085.495 kb on + strand, within Dsui_1976 at 2085.542 kb on + strand, within Dsui_1976 at 2085.637 kb on + strand, within Dsui_1976 at 2085.645 kb on - strand, within Dsui_1976 at 2085.692 kb on + strand, within Dsui_1976 at 2085.702 kb on + strand, within Dsui_1976 at 2085.774 kb on - strand, within Dsui_1976 at 2085.816 kb on + strand at 2085.822 kb on - strand at 2085.822 kb on - strand at 2085.822 kb on - strand at 2085.824 kb on - strand at 2085.858 kb on - strand at 2085.872 kb on - strand at 2085.890 kb on + strand at 2085.890 kb on + strand at 2085.895 kb on + strand at 2085.898 kb on - strand at 2085.898 kb on - strand at 2085.910 kb on + strand at 2085.910 kb on + strand at 2085.910 kb on + strand at 2085.910 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on + strand at 2085.918 kb on - strand at 2085.931 kb on - strand at 2085.938 kb on + strand at 2087.754 kb on + strand, within Dsui_1978 at 2087.754 kb on + strand, within Dsui_1978
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 2,085,048 + Dsui_1976 0.11 -1.4 2,085,099 + Dsui_1976 0.17 -0.5 2,085,099 + Dsui_1976 0.17 -0.5 2,085,099 + Dsui_1976 0.17 -0.5 2,085,135 + Dsui_1976 0.21 -0.6 2,085,143 - -0.2 2,085,221 - +0.8 2,085,262 - +0.8 2,085,344 + Dsui_1976 0.43 -0.5 2,085,344 + Dsui_1976 0.43 +0.0 2,085,474 + Dsui_1976 0.57 -0.3 2,085,485 + Dsui_1976 0.59 -0.7 2,085,495 + Dsui_1976 0.60 -1.6 2,085,542 + Dsui_1976 0.65 -0.6 2,085,637 + Dsui_1976 0.75 -1.9 2,085,645 - Dsui_1976 0.76 -2.7 2,085,692 + Dsui_1976 0.81 -0.5 2,085,702 + Dsui_1976 0.82 -0.9 2,085,774 - Dsui_1976 0.90 -0.8 2,085,816 + -0.2 2,085,822 - +0.8 2,085,822 - -0.8 2,085,822 - -0.2 2,085,824 - -3.3 2,085,858 - +0.8 2,085,872 - -0.8 2,085,890 + -3.7 2,085,890 + +1.2 2,085,895 + -0.2 2,085,898 - +0.8 2,085,898 - +0.8 2,085,910 + -2.2 2,085,910 + -2.9 2,085,910 + -4.1 2,085,910 + -0.9 2,085,918 + -3.7 2,085,918 + -5.1 2,085,918 + -0.8 2,085,918 + -4.5 2,085,918 + -1.5 2,085,918 - +0.8 2,085,931 - +0.8 2,085,938 + +0.7 2,087,754 + Dsui_1978 0.78 -5.5 2,087,754 + Dsui_1978 0.78 -2.9
Or see this region's nucleotide sequence