Strain Fitness in Dechlorosoma suillum PS around Dsui_1526

Experiment: ALP with copper (II) chloride 0.6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1525 and Dsui_1526 are separated by 73 nucleotidesDsui_1526 and Dsui_1527 are separated by 635 nucleotides Dsui_1525: Dsui_1525 - sulfate/thiosulfate-binding protein, at 1,587,583 to 1,588,590 _1525 Dsui_1526: Dsui_1526 - hypothetical protein, at 1,588,664 to 1,588,861 _1526 Dsui_1527: Dsui_1527 - hypothetical protein, at 1,589,497 to 1,589,706 _1527 Position (kb) 1588 1589Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1587.677 kb on - strandat 1587.692 kb on + strand, within Dsui_1525at 1587.700 kb on - strand, within Dsui_1525at 1587.700 kb on - strand, within Dsui_1525at 1587.719 kb on - strand, within Dsui_1525at 1587.757 kb on + strand, within Dsui_1525at 1587.772 kb on - strand, within Dsui_1525at 1587.839 kb on + strand, within Dsui_1525at 1587.839 kb on + strand, within Dsui_1525at 1587.923 kb on - strand, within Dsui_1525at 1587.928 kb on + strand, within Dsui_1525at 1587.964 kb on + strand, within Dsui_1525at 1588.041 kb on - strandat 1588.148 kb on - strandat 1588.169 kb on - strand, within Dsui_1525at 1588.211 kb on - strand, within Dsui_1525at 1588.340 kb on - strand, within Dsui_1525at 1588.376 kb on - strand, within Dsui_1525at 1588.389 kb on + strand, within Dsui_1525at 1588.389 kb on + strand, within Dsui_1525at 1588.389 kb on + strand, within Dsui_1525at 1588.507 kb on - strandat 1588.519 kb on + strandat 1588.519 kb on + strandat 1588.536 kb on - strandat 1588.571 kb on - strandat 1588.572 kb on + strandat 1588.572 kb on + strandat 1588.655 kb on + strandat 1588.726 kb on + strand, within Dsui_1526at 1588.726 kb on + strandat 1588.734 kb on - strand, within Dsui_1526at 1588.754 kb on + strand, within Dsui_1526at 1588.782 kb on - strand, within Dsui_1526at 1588.803 kb on - strand, within Dsui_1526at 1588.803 kb on - strand, within Dsui_1526at 1588.831 kb on + strand, within Dsui_1526at 1588.870 kb on + strandat 1588.892 kb on - strandat 1588.922 kb on - strandat 1588.922 kb on - strandat 1589.161 kb on - strandat 1589.163 kb on + strandat 1589.164 kb on - strandat 1589.203 kb on + strandat 1589.218 kb on - strandat 1589.275 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM
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1,587,677 - -1.2
1,587,692 + Dsui_1525 0.11 -0.7
1,587,700 - Dsui_1525 0.12 +0.8
1,587,700 - Dsui_1525 0.12 -0.7
1,587,719 - Dsui_1525 0.13 -1.5
1,587,757 + Dsui_1525 0.17 -2.0
1,587,772 - Dsui_1525 0.19 +0.8
1,587,839 + Dsui_1525 0.25 -1.0
1,587,839 + Dsui_1525 0.25 -1.5
1,587,923 - Dsui_1525 0.34 -0.2
1,587,928 + Dsui_1525 0.34 -3.1
1,587,964 + Dsui_1525 0.38 +0.8
1,588,041 - -0.2
1,588,148 - +0.8
1,588,169 - Dsui_1525 0.58 -0.2
1,588,211 - Dsui_1525 0.62 -0.7
1,588,340 - Dsui_1525 0.75 +0.8
1,588,376 - Dsui_1525 0.79 -0.2
1,588,389 + Dsui_1525 0.80 -1.0
1,588,389 + Dsui_1525 0.80 -2.2
1,588,389 + Dsui_1525 0.80 -0.7
1,588,507 - +0.8
1,588,519 + -4.0
1,588,519 + -1.4
1,588,536 - -3.1
1,588,571 - +0.8
1,588,572 + -3.4
1,588,572 + +0.8
1,588,655 + -0.8
1,588,726 + Dsui_1526 0.31 -0.2
1,588,726 + -0.2
1,588,734 - Dsui_1526 0.35 -2.5
1,588,754 + Dsui_1526 0.45 -0.2
1,588,782 - Dsui_1526 0.60 -1.6
1,588,803 - Dsui_1526 0.70 -2.5
1,588,803 - Dsui_1526 0.70 -3.5
1,588,831 + Dsui_1526 0.84 +0.8
1,588,870 + -1.2
1,588,892 - -2.2
1,588,922 - -2.1
1,588,922 - -1.9
1,589,161 - -2.0
1,589,163 + -1.2
1,589,164 - +0.8
1,589,203 + -0.2
1,589,218 - +0.8
1,589,275 - -1.3

Or see this region's nucleotide sequence