Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1030 and Dsui_1031 are separated by 122 nucleotides Dsui_1031 and Dsui_1032 are separated by 167 nucleotides
Dsui_1030: Dsui_1030 - dynamin family protein, at 1,061,620 to 1,063,575
_1030
Dsui_1031: Dsui_1031 - formamidopyrimidine-DNA glycosylase Fpg, at 1,063,698 to 1,064,525
_1031
Dsui_1032: Dsui_1032 - Flp pilus assembly protein TadD, at 1,064,693 to 1,066,432
_1032
Position (kb)
1063
1064
1065 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 1062.725 kb on + strand, within Dsui_1030 at 1062.779 kb on + strand, within Dsui_1030 at 1062.820 kb on + strand, within Dsui_1030 at 1062.898 kb on + strand, within Dsui_1030 at 1062.938 kb on - strand, within Dsui_1030 at 1063.080 kb on - strand, within Dsui_1030 at 1063.130 kb on - strand, within Dsui_1030 at 1063.143 kb on + strand, within Dsui_1030 at 1063.318 kb on + strand, within Dsui_1030 at 1063.355 kb on + strand, within Dsui_1030 at 1063.365 kb on + strand, within Dsui_1030 at 1063.365 kb on + strand, within Dsui_1030 at 1063.365 kb on + strand, within Dsui_1030 at 1063.365 kb on + strand, within Dsui_1030 at 1063.373 kb on - strand, within Dsui_1030 at 1063.456 kb on + strand at 1063.481 kb on - strand at 1063.508 kb on + strand at 1063.555 kb on - strand at 1063.560 kb on - strand at 1063.742 kb on + strand at 1063.750 kb on - strand at 1063.815 kb on - strand, within Dsui_1031 at 1063.887 kb on + strand, within Dsui_1031 at 1064.017 kb on + strand, within Dsui_1031 at 1064.071 kb on + strand at 1064.089 kb on - strand at 1064.158 kb on - strand, within Dsui_1031 at 1064.184 kb on - strand, within Dsui_1031 at 1064.200 kb on - strand, within Dsui_1031 at 1064.228 kb on + strand, within Dsui_1031 at 1064.371 kb on - strand, within Dsui_1031 at 1064.407 kb on + strand, within Dsui_1031 at 1064.509 kb on - strand at 1064.562 kb on + strand at 1064.569 kb on - strand at 1064.587 kb on - strand at 1064.643 kb on - strand at 1064.648 kb on - strand at 1064.678 kb on - strand at 1064.777 kb on + strand at 1064.825 kb on + strand at 1065.021 kb on + strand, within Dsui_1032 at 1065.162 kb on - strand at 1065.469 kb on + strand, within Dsui_1032
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 1,062,725 + Dsui_1030 0.56 -0.8 1,062,779 + Dsui_1030 0.59 -0.8 1,062,820 + Dsui_1030 0.61 -0.2 1,062,898 + Dsui_1030 0.65 +0.8 1,062,938 - Dsui_1030 0.67 -1.2 1,063,080 - Dsui_1030 0.75 -1.0 1,063,130 - Dsui_1030 0.77 -1.0 1,063,143 + Dsui_1030 0.78 +0.8 1,063,318 + Dsui_1030 0.87 -1.6 1,063,355 + Dsui_1030 0.89 +0.8 1,063,365 + Dsui_1030 0.89 +0.8 1,063,365 + Dsui_1030 0.89 -1.8 1,063,365 + Dsui_1030 0.89 +0.8 1,063,365 + Dsui_1030 0.89 -1.7 1,063,373 - Dsui_1030 0.90 -1.1 1,063,456 + -0.2 1,063,481 - -0.8 1,063,508 + -0.8 1,063,555 - -2.2 1,063,560 - -0.9 1,063,742 + -0.2 1,063,750 - +0.8 1,063,815 - Dsui_1031 0.14 -2.6 1,063,887 + Dsui_1031 0.23 -1.6 1,064,017 + Dsui_1031 0.39 +0.8 1,064,071 + +0.8 1,064,089 - +0.8 1,064,158 - Dsui_1031 0.56 -3.1 1,064,184 - Dsui_1031 0.59 -2.2 1,064,200 - Dsui_1031 0.61 -1.6 1,064,228 + Dsui_1031 0.64 -0.2 1,064,371 - Dsui_1031 0.81 -0.2 1,064,407 + Dsui_1031 0.86 +0.8 1,064,509 - -0.9 1,064,562 + -0.2 1,064,569 - +0.8 1,064,587 - -2.0 1,064,643 - +0.8 1,064,648 - +0.8 1,064,678 - +0.8 1,064,777 + -2.6 1,064,825 + -5.4 1,065,021 + Dsui_1032 0.19 -7.4 1,065,162 - +0.8 1,065,469 + Dsui_1032 0.45 -4.4
Or see this region's nucleotide sequence