Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1013 and Dsui_1014 are separated by 69 nucleotides Dsui_1014 and Dsui_1015 are separated by 2 nucleotides Dsui_1015 and Dsui_1016 are separated by 17 nucleotides
Dsui_1013: Dsui_1013 - thiamine biosynthesis protein ThiS, at 1,046,193 to 1,046,402
_1013
Dsui_1014: Dsui_1014 - putative enzyme of thiazole biosynthesis, at 1,046,472 to 1,047,257
_1014
Dsui_1015: Dsui_1015 - hypothetical protein, at 1,047,260 to 1,048,507
_1015
Dsui_1016: Dsui_1016 - tRNA (guanine-N(7)-)-methyltransferase, at 1,048,525 to 1,049,280
_1016
Position (kb)
1047
1048
1049 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1047.308 kb on - strand at 1047.343 kb on + strand at 1047.410 kb on + strand, within Dsui_1015 at 1047.459 kb on - strand, within Dsui_1015 at 1047.484 kb on + strand, within Dsui_1015 at 1047.624 kb on - strand, within Dsui_1015 at 1047.872 kb on - strand at 1047.892 kb on + strand, within Dsui_1015 at 1047.957 kb on + strand, within Dsui_1015 at 1048.102 kb on + strand, within Dsui_1015 at 1048.264 kb on + strand, within Dsui_1015 at 1048.338 kb on + strand, within Dsui_1015 at 1048.443 kb on - strand at 1048.471 kb on + strand at 1048.546 kb on + strand at 1048.571 kb on - strand at 1048.571 kb on - strand at 1048.580 kb on + strand at 1048.603 kb on + strand, within Dsui_1016 at 1048.847 kb on + strand, within Dsui_1016 at 1048.855 kb on - strand, within Dsui_1016 at 1048.890 kb on + strand, within Dsui_1016 at 1049.029 kb on - strand, within Dsui_1016 at 1049.224 kb on - strand at 1049.248 kb on + strand at 1049.251 kb on - strand at 1049.386 kb on + strand at 1049.386 kb on + strand at 1049.386 kb on + strand at 1049.394 kb on + strand at 1049.394 kb on - strand at 1049.434 kb on + strand at 1049.434 kb on - strand at 1049.472 kb on - strand at 1049.499 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 1,047,308 - -0.8 1,047,343 + -5.4 1,047,410 + Dsui_1015 0.12 -3.7 1,047,459 - Dsui_1015 0.16 -0.2 1,047,484 + Dsui_1015 0.18 -5.7 1,047,624 - Dsui_1015 0.29 +0.8 1,047,872 - +0.8 1,047,892 + Dsui_1015 0.51 -4.9 1,047,957 + Dsui_1015 0.56 -4.8 1,048,102 + Dsui_1015 0.67 -6.3 1,048,264 + Dsui_1015 0.80 -3.4 1,048,338 + Dsui_1015 0.86 -4.9 1,048,443 - -1.2 1,048,471 + -4.1 1,048,546 + -0.3 1,048,571 - -0.2 1,048,571 - -0.8 1,048,580 + -0.0 1,048,603 + Dsui_1016 0.10 +0.4 1,048,847 + Dsui_1016 0.43 -0.3 1,048,855 - Dsui_1016 0.44 -0.8 1,048,890 + Dsui_1016 0.48 +0.1 1,049,029 - Dsui_1016 0.67 -0.2 1,049,224 - -0.8 1,049,248 + +0.8 1,049,251 - +0.8 1,049,386 + -0.9 1,049,386 + -3.1 1,049,386 + -3.0 1,049,394 + -1.0 1,049,394 - -2.9 1,049,434 + -1.2 1,049,434 - +0.8 1,049,472 - -1.8 1,049,499 - +0.8
Or see this region's nucleotide sequence