Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0831 and Dsui_0833 are separated by 398 nucleotides Dsui_0833 and Dsui_0834 are separated by 41 nucleotides Dsui_0834 and Dsui_0835 overlap by 1 nucleotides Dsui_0835 and Dsui_0836 are separated by 55 nucleotides
Dsui_0831: Dsui_0831 - chromosomal replication initiator protein DnaA, at 846,680 to 848,101
_0831
Dsui_0833: Dsui_0833 - ribosomal protein L34, bacterial type, at 848,500 to 848,634
_0833
Dsui_0834: Dsui_0834 - ribonuclease P protein component, at 848,676 to 849,140
_0834
Dsui_0835: Dsui_0835 - conserved hypothetical protein YidD, at 849,140 to 849,370
_0835
Dsui_0836: Dsui_0836 - membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein, at 849,426 to 851,081
_0836
Position (kb) 848
849
850 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 848.183 kb on - strand at 848.236 kb on - strand at 848.253 kb on - strand at 848.253 kb on - strand at 848.258 kb on - strand at 848.262 kb on + strand at 848.262 kb on + strand at 848.262 kb on + strand at 848.265 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.270 kb on - strand at 848.388 kb on - strand at 848.427 kb on + strand at 848.430 kb on - strand at 848.435 kb on - strand at 848.435 kb on - strand at 848.638 kb on + strand at 849.058 kb on - strand at 849.109 kb on + strand at 849.148 kb on + strand at 849.156 kb on - strand at 849.157 kb on + strand at 849.163 kb on - strand at 849.170 kb on - strand at 849.210 kb on + strand, within Dsui_0835 at 849.215 kb on + strand, within Dsui_0835 at 849.249 kb on + strand, within Dsui_0835 at 849.249 kb on + strand, within Dsui_0835 at 849.249 kb on + strand, within Dsui_0835 at 849.249 kb on + strand, within Dsui_0835 at 849.257 kb on - strand, within Dsui_0835 at 849.264 kb on - strand, within Dsui_0835 at 849.272 kb on + strand, within Dsui_0835 at 849.296 kb on + strand, within Dsui_0835
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 848,183 - -1.0 848,236 - -0.9 848,253 - -1.3 848,253 - -1.6 848,258 - -0.7 848,262 + +0.9 848,262 + -0.1 848,262 + +0.9 848,265 - -0.9 848,270 - -1.8 848,270 - -0.4 848,270 - -1.5 848,270 - -1.1 848,270 - -1.2 848,270 - -1.9 848,270 - -0.8 848,388 - +0.9 848,427 + -1.7 848,430 - -0.1 848,435 - -0.1 848,435 - +0.9 848,638 + -2.9 849,058 - +0.9 849,109 + -1.0 849,148 + -2.7 849,156 - +0.9 849,157 + -0.9 849,163 - +0.9 849,170 - +0.9 849,210 + Dsui_0835 0.30 -3.5 849,215 + Dsui_0835 0.32 -2.3 849,249 + Dsui_0835 0.47 -3.7 849,249 + Dsui_0835 0.47 -3.5 849,249 + Dsui_0835 0.47 -5.1 849,249 + Dsui_0835 0.47 -4.5 849,257 - Dsui_0835 0.51 +0.9 849,264 - Dsui_0835 0.54 +0.9 849,272 + Dsui_0835 0.57 -2.7 849,296 + Dsui_0835 0.68 -3.8
Or see this region's nucleotide sequence