Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0760 and Dsui_0761 are separated by 99 nucleotides Dsui_0761 and Dsui_0762 are separated by 7 nucleotides Dsui_0762 and Dsui_0763 are separated by 231 nucleotides
Dsui_0760: Dsui_0760 - diguanylate cyclase (GGDEF) domain-containing protein, at 760,145 to 762,571
_0760
Dsui_0761: Dsui_0761 - phosphoserine phosphatase/homoserine phosphotransferase, at 762,671 to 763,279
_0761
Dsui_0762: Dsui_0762 - formyltetrahydrofolate deformylase, at 763,287 to 764,147
_0762
Dsui_0763: Dsui_0763 - ammonium transporter, at 764,379 to 765,779
_0763
Position (kb)
763
764
765 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 762.307 kb on + strand at 762.473 kb on - strand at 762.507 kb on - strand at 762.528 kb on + strand at 762.608 kb on + strand at 762.615 kb on + strand at 764.273 kb on + strand at 764.290 kb on + strand at 764.342 kb on + strand at 764.415 kb on + strand at 764.415 kb on + strand at 764.527 kb on + strand at 764.535 kb on - strand at 764.535 kb on - strand at 764.592 kb on + strand, within Dsui_0763 at 764.714 kb on + strand, within Dsui_0763 at 764.721 kb on - strand, within Dsui_0763 at 764.729 kb on + strand, within Dsui_0763 at 764.755 kb on - strand, within Dsui_0763 at 764.845 kb on + strand, within Dsui_0763 at 764.845 kb on + strand, within Dsui_0763 at 764.845 kb on + strand, within Dsui_0763 at 764.853 kb on - strand, within Dsui_0763 at 764.980 kb on - strand, within Dsui_0763 at 764.985 kb on - strand, within Dsui_0763 at 764.987 kb on + strand, within Dsui_0763 at 765.014 kb on + strand, within Dsui_0763 at 765.016 kb on - strand, within Dsui_0763 at 765.016 kb on - strand, within Dsui_0763 at 765.052 kb on + strand at 765.092 kb on - strand, within Dsui_0763 at 765.126 kb on + strand, within Dsui_0763
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 762,307 + +0.8 762,473 - +0.8 762,507 - +0.8 762,528 + -3.8 762,608 + +2.4 762,615 + -1.8 764,273 + -0.2 764,290 + +0.8 764,342 + +0.8 764,415 + -1.5 764,415 + -1.2 764,527 + +0.8 764,535 - +0.8 764,535 - +0.8 764,592 + Dsui_0763 0.15 +0.8 764,714 + Dsui_0763 0.24 -0.2 764,721 - Dsui_0763 0.24 -1.2 764,729 + Dsui_0763 0.25 -0.2 764,755 - Dsui_0763 0.27 -2.2 764,845 + Dsui_0763 0.33 -1.8 764,845 + Dsui_0763 0.33 -1.2 764,845 + Dsui_0763 0.33 -0.2 764,853 - Dsui_0763 0.34 -0.8 764,980 - Dsui_0763 0.43 -1.2 764,985 - Dsui_0763 0.43 -0.2 764,987 + Dsui_0763 0.43 -0.8 765,014 + Dsui_0763 0.45 -1.5 765,016 - Dsui_0763 0.45 +0.8 765,016 - Dsui_0763 0.45 -0.8 765,052 + +0.8 765,092 - Dsui_0763 0.51 -1.5 765,126 + Dsui_0763 0.53 -0.2
Or see this region's nucleotide sequence