Strain Fitness in Dechlorosoma suillum PS around Dsui_0753

Experiment: ALP with copper (II) chloride 0.6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0751 and Dsui_0752 are separated by 212 nucleotidesDsui_0752 and Dsui_0753 are separated by 130 nucleotidesDsui_0753 and Dsui_0754 are separated by 130 nucleotidesDsui_0754 and Dsui_0755 are separated by 133 nucleotides Dsui_0751: Dsui_0751 - Eco57I restriction endonuclease, at 750,518 to 751,729 _0751 Dsui_0752: Dsui_0752 - hypothetical protein, at 751,942 to 752,103 _0752 Dsui_0753: Dsui_0753 - ATPase component of ABC transporters with duplicated ATPase domain, at 752,234 to 753,850 _0753 Dsui_0754: Dsui_0754 - hypothetical protein, at 753,981 to 754,355 _0754 Dsui_0755: Dsui_0755 - hypothetical protein, at 754,489 to 755,103 _0755 Position (kb) 752 753 754Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 751.317 kb on - strand, within Dsui_0751at 751.398 kb on - strand, within Dsui_0751at 751.458 kb on + strand, within Dsui_0751at 751.458 kb on + strand, within Dsui_0751at 751.466 kb on - strand, within Dsui_0751at 751.466 kb on - strand, within Dsui_0751at 751.466 kb on - strand, within Dsui_0751at 751.509 kb on - strand, within Dsui_0751at 751.514 kb on - strand, within Dsui_0751at 751.624 kb on - strandat 751.666 kb on - strandat 751.717 kb on - strandat 751.743 kb on + strandat 751.745 kb on - strandat 751.745 kb on - strandat 751.745 kb on - strandat 751.778 kb on + strandat 751.778 kb on + strandat 751.783 kb on + strandat 751.785 kb on - strandat 751.821 kb on + strandat 751.821 kb on + strandat 751.829 kb on - strandat 751.876 kb on + strandat 751.876 kb on + strandat 751.876 kb on + strandat 751.876 kb on + strandat 751.876 kb on + strandat 751.876 kb on + strandat 751.876 kb on + strandat 751.876 kb on + strandat 751.884 kb on - strandat 751.884 kb on - strandat 751.884 kb on - strandat 751.884 kb on - strandat 751.884 kb on - strandat 751.884 kb on - strandat 751.894 kb on - strandat 751.914 kb on + strandat 751.914 kb on + strandat 751.914 kb on + strandat 751.933 kb on + strandat 751.978 kb on + strand, within Dsui_0752at 752.028 kb on + strand, within Dsui_0752at 752.035 kb on + strand, within Dsui_0752at 752.036 kb on - strand, within Dsui_0752at 752.036 kb on - strandat 752.036 kb on - strand, within Dsui_0752at 752.040 kb on + strand, within Dsui_0752at 752.048 kb on - strand, within Dsui_0752at 752.059 kb on + strand, within Dsui_0752at 752.271 kb on - strandat 752.329 kb on + strandat 752.419 kb on + strand, within Dsui_0753at 752.438 kb on - strand, within Dsui_0753at 752.571 kb on + strand, within Dsui_0753at 752.680 kb on + strand, within Dsui_0753at 752.684 kb on + strand, within Dsui_0753at 752.731 kb on + strand, within Dsui_0753at 752.734 kb on - strandat 752.867 kb on - strandat 752.892 kb on - strand, within Dsui_0753at 752.969 kb on - strand, within Dsui_0753at 753.012 kb on - strand, within Dsui_0753at 753.132 kb on + strand, within Dsui_0753at 753.211 kb on + strand, within Dsui_0753at 753.259 kb on - strand, within Dsui_0753at 753.385 kb on + strand, within Dsui_0753at 753.559 kb on - strand, within Dsui_0753at 753.559 kb on - strand, within Dsui_0753at 753.693 kb on - strandat 753.703 kb on - strandat 753.704 kb on - strandat 753.714 kb on - strandat 753.727 kb on - strandat 754.005 kb on - strandat 754.016 kb on + strandat 754.030 kb on + strand, within Dsui_0754at 754.030 kb on + strand, within Dsui_0754at 754.036 kb on + strand, within Dsui_0754at 754.084 kb on + strand, within Dsui_0754at 754.084 kb on + strand, within Dsui_0754at 754.085 kb on - strandat 754.100 kb on - strand, within Dsui_0754at 754.100 kb on - strand, within Dsui_0754at 754.122 kb on - strand, within Dsui_0754at 754.185 kb on - strand, within Dsui_0754at 754.226 kb on + strand, within Dsui_0754at 754.272 kb on + strand, within Dsui_0754at 754.346 kb on + strandat 754.365 kb on - strandat 754.421 kb on + strandat 754.438 kb on - strandat 754.458 kb on - strandat 754.492 kb on + strandat 754.493 kb on - strandat 754.500 kb on - strandat 754.500 kb on - strandat 754.549 kb on + strandat 754.549 kb on + strandat 754.583 kb on + strand, within Dsui_0755at 754.583 kb on + strand, within Dsui_0755at 754.589 kb on - strand, within Dsui_0755at 754.589 kb on - strand, within Dsui_0755at 754.591 kb on - strand, within Dsui_0755at 754.591 kb on - strand, within Dsui_0755at 754.602 kb on - strand, within Dsui_0755at 754.638 kb on + strand, within Dsui_0755at 754.648 kb on + strand, within Dsui_0755at 754.655 kb on + strand, within Dsui_0755at 754.655 kb on + strand, within Dsui_0755at 754.663 kb on - strand, within Dsui_0755at 754.781 kb on + strand, within Dsui_0755at 754.789 kb on - strand, within Dsui_0755at 754.832 kb on + strand, within Dsui_0755at 754.832 kb on + strand, within Dsui_0755at 754.840 kb on - strand, within Dsui_0755at 754.840 kb on - strand, within Dsui_0755

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM
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751,317 - Dsui_0751 0.66 -5.1
751,398 - Dsui_0751 0.73 -3.4
751,458 + Dsui_0751 0.78 -0.2
751,458 + Dsui_0751 0.78 -1.5
751,466 - Dsui_0751 0.78 -2.5
751,466 - Dsui_0751 0.78 -1.7
751,466 - Dsui_0751 0.78 -3.7
751,509 - Dsui_0751 0.82 -3.1
751,514 - Dsui_0751 0.82 -4.1
751,624 - -3.6
751,666 - -2.0
751,717 - -2.1
751,743 + -1.8
751,745 - -0.2
751,745 - -0.5
751,745 - -1.2
751,778 + +0.8
751,778 + -1.5
751,783 + -0.2
751,785 - -0.2
751,821 + -0.7
751,821 + -0.3
751,829 - -0.8
751,876 + -1.3
751,876 + -1.6
751,876 + -0.7
751,876 + -0.9
751,876 + -0.8
751,876 + -0.9
751,876 + -1.2
751,876 + -1.3
751,884 - -0.8
751,884 - +0.8
751,884 - -0.2
751,884 - -0.8
751,884 - -1.2
751,884 - +0.8
751,894 - -0.2
751,914 + -1.3
751,914 + -1.3
751,914 + -0.5
751,933 + -0.5
751,978 + Dsui_0752 0.22 -1.4
752,028 + Dsui_0752 0.53 -1.2
752,035 + Dsui_0752 0.57 -1.0
752,036 - Dsui_0752 0.58 -1.5
752,036 - -0.2
752,036 - Dsui_0752 0.58 +0.8
752,040 + Dsui_0752 0.60 -0.8
752,048 - Dsui_0752 0.65 -0.2
752,059 + Dsui_0752 0.72 +0.4
752,271 - -1.2
752,329 + -1.7
752,419 + Dsui_0753 0.11 -1.1
752,438 - Dsui_0753 0.13 -1.2
752,571 + Dsui_0753 0.21 -1.1
752,680 + Dsui_0753 0.28 -1.9
752,684 + Dsui_0753 0.28 -3.4
752,731 + Dsui_0753 0.31 -3.4
752,734 - -1.2
752,867 - -0.2
752,892 - Dsui_0753 0.41 -1.5
752,969 - Dsui_0753 0.45 +1.4
753,012 - Dsui_0753 0.48 -1.2
753,132 + Dsui_0753 0.56 -1.3
753,211 + Dsui_0753 0.60 -0.5
753,259 - Dsui_0753 0.63 -0.8
753,385 + Dsui_0753 0.71 -1.5
753,559 - Dsui_0753 0.82 -0.2
753,559 - Dsui_0753 0.82 -2.9
753,693 - -1.2
753,703 - -0.8
753,704 - +0.8
753,714 - -0.2
753,727 - -0.4
754,005 - -0.6
754,016 + +2.1
754,030 + Dsui_0754 0.13 -1.8
754,030 + Dsui_0754 0.13 -0.2
754,036 + Dsui_0754 0.15 -0.2
754,084 + Dsui_0754 0.27 -1.2
754,084 + Dsui_0754 0.27 +0.8
754,085 - -0.2
754,100 - Dsui_0754 0.32 +3.1
754,100 - Dsui_0754 0.32 -2.5
754,122 - Dsui_0754 0.38 -1.3
754,185 - Dsui_0754 0.54 -2.6
754,226 + Dsui_0754 0.65 -1.2
754,272 + Dsui_0754 0.78 -0.8
754,346 + -0.2
754,365 - -0.2
754,421 + -0.8
754,438 - -1.8
754,458 - -1.2
754,492 + -0.8
754,493 - -1.1
754,500 - -1.8
754,500 - -0.2
754,549 + +0.8
754,549 + -1.2
754,583 + Dsui_0755 0.15 +0.8
754,583 + Dsui_0755 0.15 -0.2
754,589 - Dsui_0755 0.16 -1.5
754,589 - Dsui_0755 0.16 -3.4
754,591 - Dsui_0755 0.17 -1.1
754,591 - Dsui_0755 0.17 -1.2
754,602 - Dsui_0755 0.18 -2.8
754,638 + Dsui_0755 0.24 -0.8
754,648 + Dsui_0755 0.26 +0.8
754,655 + Dsui_0755 0.27 -1.5
754,655 + Dsui_0755 0.27 +0.5
754,663 - Dsui_0755 0.28 -0.2
754,781 + Dsui_0755 0.47 -1.2
754,789 - Dsui_0755 0.49 +2.3
754,832 + Dsui_0755 0.56 +0.8
754,832 + Dsui_0755 0.56 -2.2
754,840 - Dsui_0755 0.57 -2.8
754,840 - Dsui_0755 0.57 -2.2

Or see this region's nucleotide sequence