Strain Fitness in Dechlorosoma suillum PS around Dsui_0746

Experiment: ALP with copper (II) chloride 0.6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0745 and Dsui_0746 overlap by 13 nucleotidesDsui_0746 and Dsui_0747 are separated by 94 nucleotides Dsui_0745: Dsui_0745 - membrane-associated lipoprotein involved in thiamine biosynthesis, at 742,780 to 743,820 _0745 Dsui_0746: Dsui_0746 - glutathione synthetase, at 743,808 to 744,755 _0746 Dsui_0747: Dsui_0747 - glutamate--cysteine ligase, at 744,850 to 746,130 _0747 Position (kb) 743 744 745Strain fitness (log2 ratio) -3 -2 -1 0 1at 742.811 kb on - strandat 742.811 kb on - strandat 742.954 kb on - strand, within Dsui_0745at 742.959 kb on - strand, within Dsui_0745at 743.025 kb on - strand, within Dsui_0745at 743.076 kb on + strandat 743.138 kb on - strand, within Dsui_0745at 743.281 kb on + strand, within Dsui_0745at 743.771 kb on + strandat 743.863 kb on - strandat 743.955 kb on - strand, within Dsui_0746at 744.017 kb on + strand, within Dsui_0746at 744.104 kb on - strand, within Dsui_0746at 744.137 kb on - strand, within Dsui_0746at 744.152 kb on - strand, within Dsui_0746at 744.165 kb on + strand, within Dsui_0746at 744.192 kb on + strand, within Dsui_0746at 744.245 kb on + strandat 744.325 kb on - strand, within Dsui_0746at 744.350 kb on - strand, within Dsui_0746at 744.358 kb on - strand, within Dsui_0746at 744.403 kb on + strand, within Dsui_0746at 744.436 kb on + strand, within Dsui_0746at 744.438 kb on - strand, within Dsui_0746at 744.455 kb on + strandat 744.459 kb on + strandat 744.471 kb on - strand, within Dsui_0746at 744.545 kb on - strand, within Dsui_0746at 744.626 kb on + strand, within Dsui_0746at 744.626 kb on + strand, within Dsui_0746at 744.654 kb on + strand, within Dsui_0746at 744.712 kb on + strandat 744.712 kb on + strandat 744.712 kb on + strandat 744.717 kb on + strandat 744.720 kb on - strandat 744.722 kb on + strandat 744.722 kb on + strandat 744.803 kb on + strandat 744.829 kb on - strandat 744.840 kb on + strandat 744.955 kb on - strandat 744.999 kb on - strand, within Dsui_0747at 745.019 kb on - strand, within Dsui_0747at 745.143 kb on - strand, within Dsui_0747at 745.178 kb on - strand, within Dsui_0747at 745.189 kb on - strand, within Dsui_0747at 745.607 kb on - strand, within Dsui_0747at 745.614 kb on + strandat 745.683 kb on + strand, within Dsui_0747at 745.701 kb on + strand, within Dsui_0747at 745.709 kb on - strand, within Dsui_0747

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM
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742,811 - -0.8
742,811 - -0.0
742,954 - Dsui_0745 0.17 -0.5
742,959 - Dsui_0745 0.17 -0.9
743,025 - Dsui_0745 0.24 +0.5
743,076 + +0.8
743,138 - Dsui_0745 0.34 -0.9
743,281 + Dsui_0745 0.48 -0.2
743,771 + +0.8
743,863 - +0.7
743,955 - Dsui_0746 0.16 +0.2
744,017 + Dsui_0746 0.22 -2.9
744,104 - Dsui_0746 0.31 +0.0
744,137 - Dsui_0746 0.35 +0.6
744,152 - Dsui_0746 0.36 +0.5
744,165 + Dsui_0746 0.38 -1.2
744,192 + Dsui_0746 0.41 +0.8
744,245 + -0.2
744,325 - Dsui_0746 0.55 +0.4
744,350 - Dsui_0746 0.57 -0.3
744,358 - Dsui_0746 0.58 +0.3
744,403 + Dsui_0746 0.63 -1.2
744,436 + Dsui_0746 0.66 -0.8
744,438 - Dsui_0746 0.66 +0.6
744,455 + +0.8
744,459 + +0.8
744,471 - Dsui_0746 0.70 +0.4
744,545 - Dsui_0746 0.78 -0.6
744,626 + Dsui_0746 0.86 +0.8
744,626 + Dsui_0746 0.86 -0.2
744,654 + Dsui_0746 0.89 +0.8
744,712 + -2.0
744,712 + +0.8
744,712 + -0.2
744,717 + -1.2
744,720 - +0.4
744,722 + -0.8
744,722 + -0.8
744,803 + +0.8
744,829 - -0.9
744,840 + +0.8
744,955 - -1.3
744,999 - Dsui_0747 0.12 -2.6
745,019 - Dsui_0747 0.13 -1.3
745,143 - Dsui_0747 0.23 -3.6
745,178 - Dsui_0747 0.26 -2.4
745,189 - Dsui_0747 0.26 -1.9
745,607 - Dsui_0747 0.59 -1.7
745,614 + -0.2
745,683 + Dsui_0747 0.65 -0.8
745,701 + Dsui_0747 0.66 -1.5
745,709 - Dsui_0747 0.67 -3.0

Or see this region's nucleotide sequence