Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0691 and Dsui_0692 are separated by 17 nucleotides Dsui_0692 and Dsui_0693 are separated by 82 nucleotides Dsui_0693 and Dsui_0694 are separated by 90 nucleotides Dsui_0694 and Dsui_0695 are separated by 21 nucleotides
Dsui_0691: Dsui_0691 - hypothetical protein, at 687,365 to 687,562
_0691
Dsui_0692: Dsui_0692 - hypothetical protein, at 687,580 to 688,434
_0692
Dsui_0693: Dsui_0693 - hypothetical protein, at 688,517 to 689,674
_0693
Dsui_0694: Dsui_0694 - dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein, at 689,765 to 690,520
_0694
Dsui_0695: Dsui_0695 - putative ATPase of the PP-loop superfamily implicated in cell cycle control, at 690,542 to 691,441
_0695
Position (kb) 688
689
690 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 687.539 kb on - strand, within Dsui_0691 at 687.556 kb on + strand at 687.581 kb on - strand at 687.647 kb on + strand at 687.655 kb on - strand at 687.716 kb on - strand, within Dsui_0692 at 687.748 kb on - strand at 687.756 kb on + strand, within Dsui_0692 at 687.786 kb on + strand, within Dsui_0692 at 687.856 kb on - strand, within Dsui_0692 at 687.873 kb on - strand, within Dsui_0692 at 687.965 kb on + strand, within Dsui_0692 at 688.002 kb on + strand at 688.084 kb on + strand, within Dsui_0692 at 688.093 kb on - strand, within Dsui_0692 at 688.144 kb on + strand, within Dsui_0692 at 688.171 kb on + strand at 688.194 kb on - strand, within Dsui_0692 at 688.286 kb on + strand, within Dsui_0692 at 688.294 kb on - strand, within Dsui_0692 at 688.316 kb on + strand, within Dsui_0692 at 688.348 kb on - strand, within Dsui_0692 at 688.397 kb on - strand at 688.425 kb on - strand at 688.467 kb on + strand at 688.522 kb on + strand at 688.524 kb on - strand at 689.751 kb on + strand at 689.759 kb on - strand at 689.782 kb on + strand at 689.872 kb on + strand, within Dsui_0694 at 689.979 kb on + strand, within Dsui_0694 at 689.979 kb on + strand, within Dsui_0694 at 689.979 kb on + strand, within Dsui_0694 at 689.984 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.071 kb on + strand, within Dsui_0694 at 690.079 kb on - strand at 690.079 kb on - strand at 690.079 kb on - strand at 690.079 kb on - strand, within Dsui_0694 at 690.107 kb on - strand at 690.129 kb on - strand, within Dsui_0694 at 690.131 kb on + strand, within Dsui_0694 at 690.202 kb on + strand, within Dsui_0694 at 690.229 kb on - strand at 690.233 kb on + strand, within Dsui_0694 at 690.252 kb on + strand, within Dsui_0694 at 690.277 kb on + strand, within Dsui_0694 at 690.497 kb on - strand at 690.497 kb on - strand at 690.517 kb on - strand at 690.548 kb on + strand at 690.550 kb on + strand at 690.550 kb on + strand at 690.550 kb on + strand at 690.550 kb on + strand at 690.558 kb on + strand at 690.558 kb on - strand at 690.641 kb on + strand, within Dsui_0695 at 690.641 kb on + strand, within Dsui_0695 at 690.641 kb on + strand, within Dsui_0695 at 690.649 kb on - strand, within Dsui_0695 at 690.649 kb on - strand at 690.649 kb on - strand, within Dsui_0695
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 687,539 - Dsui_0691 0.88 -1.8 687,556 + +0.8 687,581 - -1.0 687,647 + +0.8 687,655 - +0.8 687,716 - Dsui_0692 0.16 +0.8 687,748 - +0.8 687,756 + Dsui_0692 0.21 -0.8 687,786 + Dsui_0692 0.24 -0.8 687,856 - Dsui_0692 0.32 +0.8 687,873 - Dsui_0692 0.34 -1.2 687,965 + Dsui_0692 0.45 +0.8 688,002 + -0.2 688,084 + Dsui_0692 0.59 +0.8 688,093 - Dsui_0692 0.60 -1.5 688,144 + Dsui_0692 0.66 -1.2 688,171 + +0.8 688,194 - Dsui_0692 0.72 +0.8 688,286 + Dsui_0692 0.83 -2.6 688,294 - Dsui_0692 0.84 -2.2 688,316 + Dsui_0692 0.86 -1.5 688,348 - Dsui_0692 0.90 -2.0 688,397 - -1.0 688,425 - -1.4 688,467 + -0.2 688,522 + +1.8 688,524 - +0.3 689,751 + -2.0 689,759 - -0.2 689,782 + -1.4 689,872 + Dsui_0694 0.14 -1.5 689,979 + Dsui_0694 0.28 -1.9 689,979 + Dsui_0694 0.28 -1.3 689,979 + Dsui_0694 0.28 -1.8 689,984 + Dsui_0694 0.29 -2.9 690,071 + Dsui_0694 0.40 -0.8 690,071 + Dsui_0694 0.40 -1.0 690,071 + Dsui_0694 0.40 -1.3 690,071 + Dsui_0694 0.40 -1.4 690,071 + Dsui_0694 0.40 -1.1 690,079 - +0.8 690,079 - +0.8 690,079 - +0.8 690,079 - Dsui_0694 0.42 -1.2 690,107 - +0.8 690,129 - Dsui_0694 0.48 -3.1 690,131 + Dsui_0694 0.48 -0.7 690,202 + Dsui_0694 0.58 -0.8 690,229 - -0.2 690,233 + Dsui_0694 0.62 -3.3 690,252 + Dsui_0694 0.64 -1.2 690,277 + Dsui_0694 0.68 -0.9 690,497 - +0.8 690,497 - +0.8 690,517 - +0.8 690,548 + -1.4 690,550 + -0.9 690,550 + -0.2 690,550 + -0.4 690,550 + -1.8 690,558 + -2.3 690,558 - -2.6 690,641 + Dsui_0695 0.11 -1.0 690,641 + Dsui_0695 0.11 -2.4 690,641 + Dsui_0695 0.11 -1.0 690,649 - Dsui_0695 0.12 -1.5 690,649 - +0.8 690,649 - Dsui_0695 0.12 -1.8
Or see this region's nucleotide sequence