Strain Fitness in Dechlorosoma suillum PS around Dsui_0644

Experiment: ALP with copper (II) chloride 0.6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0643 and Dsui_0644 are separated by 107 nucleotidesDsui_0644 and Dsui_0645 are separated by 168 nucleotides Dsui_0643: Dsui_0643 - HD-GYP domain-containing protein, at 635,904 to 637,133 _0643 Dsui_0644: Dsui_0644 - acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, at 637,241 to 638,917 _0644 Dsui_0645: Dsui_0645 - S-adenosylmethionine synthetase, at 639,086 to 640,249 _0645 Position (kb) 637 638 639Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 636.243 kb on - strand, within Dsui_0643at 636.247 kb on - strand, within Dsui_0643at 636.311 kb on - strand, within Dsui_0643at 636.331 kb on + strand, within Dsui_0643at 636.430 kb on + strand, within Dsui_0643at 636.457 kb on - strand, within Dsui_0643at 636.523 kb on - strand, within Dsui_0643at 636.623 kb on + strandat 636.743 kb on - strand, within Dsui_0643at 636.748 kb on + strand, within Dsui_0643at 636.844 kb on + strand, within Dsui_0643at 636.844 kb on + strand, within Dsui_0643at 636.860 kb on + strand, within Dsui_0643at 636.862 kb on - strand, within Dsui_0643at 636.958 kb on + strand, within Dsui_0643at 637.024 kb on - strandat 637.080 kb on - strandat 637.080 kb on - strandat 637.104 kb on + strandat 637.138 kb on - strandat 637.142 kb on + strandat 637.183 kb on - strandat 637.218 kb on + strandat 637.226 kb on - strandat 637.239 kb on + strandat 637.239 kb on + strandat 637.247 kb on - strandat 637.252 kb on - strandat 637.316 kb on + strandat 637.316 kb on + strandat 637.324 kb on - strandat 637.324 kb on - strandat 637.324 kb on - strandat 637.374 kb on - strandat 637.454 kb on + strand, within Dsui_0644at 637.572 kb on + strand, within Dsui_0644at 637.580 kb on - strand, within Dsui_0644at 637.580 kb on - strand, within Dsui_0644at 637.656 kb on + strand, within Dsui_0644at 637.662 kb on + strand, within Dsui_0644at 637.662 kb on + strand, within Dsui_0644at 637.662 kb on + strand, within Dsui_0644at 637.708 kb on - strand, within Dsui_0644at 637.808 kb on + strand, within Dsui_0644at 637.899 kb on - strand, within Dsui_0644at 637.965 kb on + strand, within Dsui_0644at 637.973 kb on - strand, within Dsui_0644at 637.978 kb on - strand, within Dsui_0644at 638.019 kb on - strand, within Dsui_0644at 638.036 kb on + strand, within Dsui_0644at 638.037 kb on - strand, within Dsui_0644at 638.128 kb on + strand, within Dsui_0644at 638.133 kb on + strand, within Dsui_0644at 638.135 kb on - strand, within Dsui_0644at 638.151 kb on - strand, within Dsui_0644at 638.184 kb on - strand, within Dsui_0644at 638.205 kb on - strand, within Dsui_0644at 638.219 kb on - strand, within Dsui_0644at 638.240 kb on + strand, within Dsui_0644at 638.264 kb on - strand, within Dsui_0644at 638.327 kb on - strand, within Dsui_0644at 638.327 kb on - strand, within Dsui_0644at 638.327 kb on - strand, within Dsui_0644at 638.327 kb on - strand, within Dsui_0644at 638.327 kb on - strand, within Dsui_0644at 638.329 kb on + strand, within Dsui_0644at 638.346 kb on + strand, within Dsui_0644at 638.390 kb on + strand, within Dsui_0644at 638.427 kb on - strand, within Dsui_0644at 638.427 kb on - strand, within Dsui_0644at 638.450 kb on + strand, within Dsui_0644at 638.531 kb on - strand, within Dsui_0644at 638.531 kb on - strand, within Dsui_0644at 638.531 kb on - strand, within Dsui_0644at 638.586 kb on - strand, within Dsui_0644at 638.600 kb on - strand, within Dsui_0644at 638.712 kb on - strand, within Dsui_0644at 638.770 kb on + strandat 638.785 kb on + strandat 638.880 kb on - strandat 638.913 kb on + strandat 638.913 kb on + strandat 638.922 kb on - strandat 638.964 kb on + strandat 638.983 kb on + strandat 639.055 kb on + strandat 639.065 kb on - strandat 639.110 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM
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636,243 - Dsui_0643 0.28 -3.5
636,247 - Dsui_0643 0.28 -4.4
636,311 - Dsui_0643 0.33 -3.1
636,331 + Dsui_0643 0.35 +0.8
636,430 + Dsui_0643 0.43 -0.2
636,457 - Dsui_0643 0.45 -3.7
636,523 - Dsui_0643 0.50 -0.8
636,623 + +0.8
636,743 - Dsui_0643 0.68 -2.0
636,748 + Dsui_0643 0.69 -1.5
636,844 + Dsui_0643 0.76 -0.8
636,844 + Dsui_0643 0.76 +0.8
636,860 + Dsui_0643 0.78 -1.2
636,862 - Dsui_0643 0.78 -2.9
636,958 + Dsui_0643 0.86 -0.2
637,024 - -1.8
637,080 - -2.5
637,080 - -1.5
637,104 + +0.8
637,138 - +0.8
637,142 + -0.2
637,183 - +0.8
637,218 + +0.8
637,226 - -1.8
637,239 + +0.8
637,239 + -0.8
637,247 - +0.8
637,252 - +0.8
637,316 + -0.2
637,316 + +0.8
637,324 - -0.8
637,324 - +0.8
637,324 - -1.6
637,374 - -0.2
637,454 + Dsui_0644 0.13 +0.8
637,572 + Dsui_0644 0.20 -0.8
637,580 - Dsui_0644 0.20 -0.2
637,580 - Dsui_0644 0.20 +0.8
637,656 + Dsui_0644 0.25 -2.4
637,662 + Dsui_0644 0.25 -0.2
637,662 + Dsui_0644 0.25 -0.2
637,662 + Dsui_0644 0.25 +0.8
637,708 - Dsui_0644 0.28 -1.8
637,808 + Dsui_0644 0.34 +0.8
637,899 - Dsui_0644 0.39 +0.8
637,965 + Dsui_0644 0.43 -0.2
637,973 - Dsui_0644 0.44 -0.2
637,978 - Dsui_0644 0.44 -2.7
638,019 - Dsui_0644 0.46 -2.0
638,036 + Dsui_0644 0.47 +0.8
638,037 - Dsui_0644 0.47 -2.4
638,128 + Dsui_0644 0.53 +0.8
638,133 + Dsui_0644 0.53 -2.0
638,135 - Dsui_0644 0.53 -0.2
638,151 - Dsui_0644 0.54 -0.2
638,184 - Dsui_0644 0.56 +1.8
638,205 - Dsui_0644 0.57 -0.2
638,219 - Dsui_0644 0.58 -0.2
638,240 + Dsui_0644 0.60 -1.2
638,264 - Dsui_0644 0.61 +0.8
638,327 - Dsui_0644 0.65 +0.8
638,327 - Dsui_0644 0.65 -0.2
638,327 - Dsui_0644 0.65 -1.5
638,327 - Dsui_0644 0.65 +0.8
638,327 - Dsui_0644 0.65 +0.8
638,329 + Dsui_0644 0.65 +0.8
638,346 + Dsui_0644 0.66 +0.8
638,390 + Dsui_0644 0.69 -0.2
638,427 - Dsui_0644 0.71 +0.8
638,427 - Dsui_0644 0.71 +0.8
638,450 + Dsui_0644 0.72 -2.0
638,531 - Dsui_0644 0.77 -1.2
638,531 - Dsui_0644 0.77 -0.8
638,531 - Dsui_0644 0.77 -0.8
638,586 - Dsui_0644 0.80 -0.2
638,600 - Dsui_0644 0.81 +0.8
638,712 - Dsui_0644 0.88 -0.2
638,770 + -0.2
638,785 + -0.8
638,880 - -0.8
638,913 + -1.2
638,913 + +0.8
638,922 - -1.2
638,964 + -1.2
638,983 + -2.0
639,055 + +0.8
639,065 - -0.4
639,110 - -0.2

Or see this region's nucleotide sequence