Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0638 and Dsui_0639 are separated by 107 nucleotides Dsui_0639 and Dsui_0640 are separated by 182 nucleotides Dsui_0640 and Dsui_0641 overlap by 4 nucleotides Dsui_0641 and Dsui_0642 are separated by 61 nucleotides
Dsui_0638: Dsui_0638 - ABC-type polar amino acid transport system, ATPase component, at 631,872 to 632,600
_0638
Dsui_0639: Dsui_0639 - hypothetical protein, at 632,708 to 632,929
_0639
Dsui_0640: Dsui_0640 - 5,10-methylenetetrahydrofolate reductase, at 633,112 to 633,951
_0640
Dsui_0641: Dsui_0641 - putative rRNA methylase, at 633,948 to 634,205
_0641
Dsui_0642: Dsui_0642 - adenosylhomocysteinase, at 634,267 to 635,667
_0642
Position (kb) 633
634 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 632.177 kb on + strand, within Dsui_0638 at 632.177 kb on + strand, within Dsui_0638 at 632.184 kb on + strand, within Dsui_0638 at 632.185 kb on - strand, within Dsui_0638 at 632.185 kb on - strand, within Dsui_0638 at 632.209 kb on - strand, within Dsui_0638 at 632.214 kb on + strand, within Dsui_0638 at 632.221 kb on + strand, within Dsui_0638 at 632.386 kb on + strand, within Dsui_0638 at 632.594 kb on + strand at 632.594 kb on + strand at 632.594 kb on + strand at 632.602 kb on - strand at 632.692 kb on - strand at 632.737 kb on - strand, within Dsui_0639 at 632.744 kb on + strand, within Dsui_0639 at 632.747 kb on - strand, within Dsui_0639 at 632.888 kb on + strand, within Dsui_0639 at 632.935 kb on - strand at 632.983 kb on - strand at 633.062 kb on + strand at 633.062 kb on + strand at 633.062 kb on + strand at 633.070 kb on - strand at 633.070 kb on - strand at 633.070 kb on - strand at 633.077 kb on - strand at 633.118 kb on - strand at 633.980 kb on + strand, within Dsui_0641 at 634.058 kb on + strand, within Dsui_0641 at 634.169 kb on + strand, within Dsui_0641 at 634.258 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 632,177 + Dsui_0638 0.42 -0.0 632,177 + Dsui_0638 0.42 -0.6 632,184 + Dsui_0638 0.43 -0.8 632,185 - Dsui_0638 0.43 +0.8 632,185 - Dsui_0638 0.43 -1.8 632,209 - Dsui_0638 0.46 -0.6 632,214 + Dsui_0638 0.47 -0.1 632,221 + Dsui_0638 0.48 -0.0 632,386 + Dsui_0638 0.71 +0.4 632,594 + -1.3 632,594 + -0.5 632,594 + -0.4 632,602 - -1.2 632,692 - -1.4 632,737 - Dsui_0639 0.13 -0.8 632,744 + Dsui_0639 0.16 -1.5 632,747 - Dsui_0639 0.18 -0.8 632,888 + Dsui_0639 0.81 -3.0 632,935 - -0.5 632,983 - -0.6 633,062 + -0.0 633,062 + -4.1 633,062 + -2.2 633,070 - -0.6 633,070 - -1.0 633,070 - -0.6 633,077 - -0.8 633,118 - -0.8 633,980 + Dsui_0641 0.12 -2.2 634,058 + Dsui_0641 0.43 -2.2 634,169 + Dsui_0641 0.86 -0.8 634,258 + +0.8
Or see this region's nucleotide sequence