Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0609 and Dsui_0610 are separated by 21 nucleotides Dsui_0610 and Dsui_0611 are separated by 59 nucleotides
Dsui_0609: Dsui_0609 - 2-polyprenylphenol hydroxylase-like oxidoreductase, at 603,809 to 604,822
_0609
Dsui_0610: Dsui_0610 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 604,844 to 606,016
_0610
Dsui_0611: Dsui_0611 - phosphotransferase system cellobiose-specific component IIC, at 606,076 to 608,163
_0611
Position (kb) 604
605
606
607 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1
2
3 at 603.891 kb on + strand at 603.896 kb on + strand at 603.896 kb on + strand at 604.048 kb on + strand, within Dsui_0609 at 604.048 kb on + strand, within Dsui_0609 at 604.056 kb on - strand, within Dsui_0609 at 604.056 kb on - strand at 604.056 kb on - strand, within Dsui_0609 at 604.066 kb on - strand, within Dsui_0609 at 604.105 kb on + strand, within Dsui_0609 at 604.113 kb on - strand, within Dsui_0609 at 604.305 kb on + strand, within Dsui_0609 at 604.383 kb on - strand, within Dsui_0609 at 604.393 kb on - strand, within Dsui_0609 at 604.403 kb on - strand, within Dsui_0609 at 604.420 kb on - strand, within Dsui_0609 at 604.433 kb on - strand, within Dsui_0609 at 604.501 kb on - strand, within Dsui_0609 at 604.515 kb on - strand, within Dsui_0609 at 604.708 kb on + strand, within Dsui_0609 at 604.735 kb on + strand at 604.873 kb on + strand at 604.913 kb on - strand at 605.000 kb on + strand, within Dsui_0610 at 605.147 kb on + strand, within Dsui_0610 at 605.155 kb on - strand, within Dsui_0610 at 605.186 kb on + strand, within Dsui_0610 at 605.194 kb on - strand, within Dsui_0610 at 605.220 kb on + strand, within Dsui_0610 at 605.228 kb on - strand, within Dsui_0610 at 605.235 kb on + strand, within Dsui_0610 at 605.243 kb on - strand, within Dsui_0610 at 605.415 kb on + strand, within Dsui_0610 at 605.427 kb on + strand, within Dsui_0610 at 605.650 kb on + strand, within Dsui_0610 at 605.691 kb on - strand, within Dsui_0610 at 605.771 kb on - strand, within Dsui_0610 at 605.778 kb on + strand, within Dsui_0610 at 605.786 kb on - strand, within Dsui_0610 at 605.796 kb on + strand, within Dsui_0610 at 605.916 kb on + strand at 605.987 kb on + strand at 606.036 kb on + strand at 606.041 kb on + strand at 606.193 kb on - strand at 606.198 kb on - strand at 606.199 kb on - strand at 606.256 kb on + strand at 606.301 kb on + strand, within Dsui_0611 at 606.510 kb on + strand, within Dsui_0611 at 606.532 kb on - strand, within Dsui_0611 at 606.590 kb on - strand at 606.597 kb on - strand, within Dsui_0611 at 606.637 kb on + strand, within Dsui_0611 at 606.671 kb on - strand, within Dsui_0611 at 606.790 kb on - strand, within Dsui_0611 at 606.869 kb on - strand, within Dsui_0611
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 603,891 + -2.7 603,896 + -2.6 603,896 + -3.3 604,048 + Dsui_0609 0.24 -2.1 604,048 + Dsui_0609 0.24 -4.0 604,056 - Dsui_0609 0.24 +0.8 604,056 - +0.8 604,056 - Dsui_0609 0.24 +0.8 604,066 - Dsui_0609 0.25 -1.6 604,105 + Dsui_0609 0.29 -2.1 604,113 - Dsui_0609 0.30 -0.2 604,305 + Dsui_0609 0.49 -2.6 604,383 - Dsui_0609 0.57 -1.8 604,393 - Dsui_0609 0.58 -0.2 604,403 - Dsui_0609 0.59 +0.8 604,420 - Dsui_0609 0.60 -0.2 604,433 - Dsui_0609 0.62 -2.6 604,501 - Dsui_0609 0.68 -2.0 604,515 - Dsui_0609 0.70 -1.2 604,708 + Dsui_0609 0.89 -1.6 604,735 + -7.1 604,873 + -1.1 604,913 - -1.2 605,000 + Dsui_0610 0.13 -1.6 605,147 + Dsui_0610 0.26 -0.9 605,155 - Dsui_0610 0.27 -0.2 605,186 + Dsui_0610 0.29 -0.3 605,194 - Dsui_0610 0.30 +0.8 605,220 + Dsui_0610 0.32 -1.1 605,228 - Dsui_0610 0.33 -2.7 605,235 + Dsui_0610 0.33 -2.0 605,243 - Dsui_0610 0.34 -0.8 605,415 + Dsui_0610 0.49 -0.3 605,427 + Dsui_0610 0.50 +0.9 605,650 + Dsui_0610 0.69 -1.3 605,691 - Dsui_0610 0.72 +0.8 605,771 - Dsui_0610 0.79 +0.8 605,778 + Dsui_0610 0.80 -0.8 605,786 - Dsui_0610 0.80 +0.8 605,796 + Dsui_0610 0.81 -2.1 605,916 + -2.0 605,987 + -0.7 606,036 + -1.0 606,041 + -0.6 606,193 - +2.8 606,198 - -0.8 606,199 - +1.1 606,256 + -0.8 606,301 + Dsui_0611 0.11 -1.2 606,510 + Dsui_0611 0.21 -0.2 606,532 - Dsui_0611 0.22 +0.8 606,590 - +0.8 606,597 - Dsui_0611 0.25 -0.2 606,637 + Dsui_0611 0.27 -0.2 606,671 - Dsui_0611 0.28 +0.8 606,790 - Dsui_0611 0.34 -0.8 606,869 - Dsui_0611 0.38 -0.2
Or see this region's nucleotide sequence