Experiment: ALP with copper (II) chloride 0.6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0607 and Dsui_0608 overlap by 7 nucleotides Dsui_0608 and Dsui_0609 are separated by 50 nucleotides Dsui_0609 and Dsui_0610 are separated by 21 nucleotides
Dsui_0607: Dsui_0607 - putative membrane protein, at 602,443 to 602,859
_0607
Dsui_0608: Dsui_0608 - nucleoside-diphosphate-sugar epimerase, at 602,853 to 603,758
_0608
Dsui_0609: Dsui_0609 - 2-polyprenylphenol hydroxylase-like oxidoreductase, at 603,809 to 604,822
_0609
Dsui_0610: Dsui_0610 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 604,844 to 606,016
_0610
Position (kb) 603
604
605 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1 at 602.894 kb on + strand at 602.905 kb on + strand at 603.018 kb on + strand at 603.041 kb on + strand, within Dsui_0608 at 603.207 kb on - strand, within Dsui_0608 at 603.207 kb on - strand, within Dsui_0608 at 603.288 kb on - strand, within Dsui_0608 at 603.394 kb on + strand at 603.394 kb on + strand, within Dsui_0608 at 603.417 kb on - strand, within Dsui_0608 at 603.435 kb on + strand at 603.436 kb on - strand, within Dsui_0608 at 603.454 kb on - strand, within Dsui_0608 at 603.454 kb on - strand, within Dsui_0608 at 603.481 kb on + strand, within Dsui_0608 at 603.494 kb on - strand, within Dsui_0608 at 603.560 kb on - strand, within Dsui_0608 at 603.571 kb on - strand, within Dsui_0608 at 603.710 kb on + strand at 603.715 kb on + strand at 603.841 kb on + strand at 603.891 kb on + strand at 603.896 kb on + strand at 603.896 kb on + strand at 604.048 kb on + strand, within Dsui_0609 at 604.048 kb on + strand, within Dsui_0609 at 604.056 kb on - strand, within Dsui_0609 at 604.056 kb on - strand at 604.056 kb on - strand, within Dsui_0609 at 604.066 kb on - strand, within Dsui_0609 at 604.105 kb on + strand, within Dsui_0609 at 604.113 kb on - strand, within Dsui_0609 at 604.305 kb on + strand, within Dsui_0609 at 604.383 kb on - strand, within Dsui_0609 at 604.393 kb on - strand, within Dsui_0609 at 604.403 kb on - strand, within Dsui_0609 at 604.420 kb on - strand, within Dsui_0609 at 604.433 kb on - strand, within Dsui_0609 at 604.501 kb on - strand, within Dsui_0609 at 604.515 kb on - strand, within Dsui_0609 at 604.708 kb on + strand, within Dsui_0609 at 604.735 kb on + strand at 604.873 kb on + strand at 604.913 kb on - strand at 605.000 kb on + strand, within Dsui_0610 at 605.147 kb on + strand, within Dsui_0610 at 605.155 kb on - strand, within Dsui_0610 at 605.186 kb on + strand, within Dsui_0610 at 605.194 kb on - strand, within Dsui_0610 at 605.220 kb on + strand, within Dsui_0610 at 605.228 kb on - strand, within Dsui_0610 at 605.235 kb on + strand, within Dsui_0610 at 605.243 kb on - strand, within Dsui_0610 at 605.415 kb on + strand, within Dsui_0610 at 605.427 kb on + strand, within Dsui_0610 at 605.650 kb on + strand, within Dsui_0610 at 605.691 kb on - strand, within Dsui_0610 at 605.771 kb on - strand, within Dsui_0610 at 605.778 kb on + strand, within Dsui_0610 at 605.786 kb on - strand, within Dsui_0610 at 605.796 kb on + strand, within Dsui_0610
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM remove 602,894 + -0.2 602,905 + -0.2 603,018 + +0.8 603,041 + Dsui_0608 0.21 -0.8 603,207 - Dsui_0608 0.39 +0.1 603,207 - Dsui_0608 0.39 -0.3 603,288 - Dsui_0608 0.48 +0.0 603,394 + +0.8 603,394 + Dsui_0608 0.60 +0.8 603,417 - Dsui_0608 0.62 +0.5 603,435 + -0.2 603,436 - Dsui_0608 0.64 -0.3 603,454 - Dsui_0608 0.66 +0.0 603,454 - Dsui_0608 0.66 -0.4 603,481 + Dsui_0608 0.69 -0.0 603,494 - Dsui_0608 0.71 -1.0 603,560 - Dsui_0608 0.78 -0.2 603,571 - Dsui_0608 0.79 +0.3 603,710 + -0.1 603,715 + +0.3 603,841 + -2.7 603,891 + -2.7 603,896 + -2.6 603,896 + -3.3 604,048 + Dsui_0609 0.24 -2.1 604,048 + Dsui_0609 0.24 -4.0 604,056 - Dsui_0609 0.24 +0.8 604,056 - +0.8 604,056 - Dsui_0609 0.24 +0.8 604,066 - Dsui_0609 0.25 -1.6 604,105 + Dsui_0609 0.29 -2.1 604,113 - Dsui_0609 0.30 -0.2 604,305 + Dsui_0609 0.49 -2.6 604,383 - Dsui_0609 0.57 -1.8 604,393 - Dsui_0609 0.58 -0.2 604,403 - Dsui_0609 0.59 +0.8 604,420 - Dsui_0609 0.60 -0.2 604,433 - Dsui_0609 0.62 -2.6 604,501 - Dsui_0609 0.68 -2.0 604,515 - Dsui_0609 0.70 -1.2 604,708 + Dsui_0609 0.89 -1.6 604,735 + -7.1 604,873 + -1.1 604,913 - -1.2 605,000 + Dsui_0610 0.13 -1.6 605,147 + Dsui_0610 0.26 -0.9 605,155 - Dsui_0610 0.27 -0.2 605,186 + Dsui_0610 0.29 -0.3 605,194 - Dsui_0610 0.30 +0.8 605,220 + Dsui_0610 0.32 -1.1 605,228 - Dsui_0610 0.33 -2.7 605,235 + Dsui_0610 0.33 -2.0 605,243 - Dsui_0610 0.34 -0.8 605,415 + Dsui_0610 0.49 -0.3 605,427 + Dsui_0610 0.50 +0.9 605,650 + Dsui_0610 0.69 -1.3 605,691 - Dsui_0610 0.72 +0.8 605,771 - Dsui_0610 0.79 +0.8 605,778 + Dsui_0610 0.80 -0.8 605,786 - Dsui_0610 0.80 +0.8 605,796 + Dsui_0610 0.81 -2.1
Or see this region's nucleotide sequence