Strain Fitness in Dechlorosoma suillum PS around Dsui_0585

Experiment: ALP with copper (II) chloride 0.6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0583 and Dsui_0584 overlap by 4 nucleotidesDsui_0584 and Dsui_0585 are separated by 7 nucleotidesDsui_0585 and Dsui_0586 are separated by 164 nucleotides Dsui_0583: Dsui_0583 - ABC-type Mn2+/Zn2+ transport system, permease component, at 581,094 to 581,912 _0583 Dsui_0584: Dsui_0584 - ATPase component of Mn/Zn ABC-type transporter, at 581,909 to 582,502 _0584 Dsui_0585: Dsui_0585 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 582,510 to 583,403 _0585 Dsui_0586: Dsui_0586 - hypothetical protein, at 583,568 to 585,022 _0586 Position (kb) 582 583 584Strain fitness (log2 ratio) -3 -2 -1 0 1at 581.555 kb on - strand, within Dsui_0583at 581.609 kb on + strandat 581.744 kb on - strand, within Dsui_0583at 581.827 kb on - strand, within Dsui_0583at 581.921 kb on - strandat 581.984 kb on - strandat 582.372 kb on + strand, within Dsui_0584at 582.406 kb on + strand, within Dsui_0584at 582.451 kb on - strandat 582.481 kb on - strandat 582.485 kb on + strandat 582.516 kb on - strandat 582.531 kb on - strandat 582.570 kb on + strandat 582.688 kb on + strandat 582.781 kb on - strandat 582.835 kb on + strand, within Dsui_0585at 582.835 kb on + strand, within Dsui_0585at 582.858 kb on - strand, within Dsui_0585at 583.021 kb on + strand, within Dsui_0585at 583.044 kb on + strand, within Dsui_0585at 583.070 kb on + strandat 583.158 kb on + strand, within Dsui_0585at 583.166 kb on - strand, within Dsui_0585at 583.225 kb on + strandat 583.276 kb on + strandat 583.305 kb on + strand, within Dsui_0585at 583.313 kb on - strand, within Dsui_0585at 583.318 kb on + strandat 583.364 kb on + strandat 583.374 kb on - strandat 583.437 kb on - strandat 583.597 kb on + strandat 583.599 kb on + strandat 583.607 kb on - strandat 583.649 kb on - strandat 583.695 kb on - strandat 583.734 kb on - strand, within Dsui_0586at 583.800 kb on - strand, within Dsui_0586at 583.807 kb on - strand, within Dsui_0586at 584.094 kb on - strand, within Dsui_0586at 584.237 kb on + strand, within Dsui_0586at 584.311 kb on + strandat 584.365 kb on - strand, within Dsui_0586

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM
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581,555 - Dsui_0583 0.56 -3.6
581,609 + -0.2
581,744 - Dsui_0583 0.79 -1.5
581,827 - Dsui_0583 0.89 -1.7
581,921 - -0.8
581,984 - -0.2
582,372 + Dsui_0584 0.78 -0.2
582,406 + Dsui_0584 0.84 -0.2
582,451 - -1.6
582,481 - -2.9
582,485 + +0.8
582,516 - -1.3
582,531 - -1.8
582,570 + +0.8
582,688 + +0.8
582,781 - +0.8
582,835 + Dsui_0585 0.36 -1.2
582,835 + Dsui_0585 0.36 +0.8
582,858 - Dsui_0585 0.39 +0.8
583,021 + Dsui_0585 0.57 -0.2
583,044 + Dsui_0585 0.60 +0.8
583,070 + +0.8
583,158 + Dsui_0585 0.72 +0.8
583,166 - Dsui_0585 0.73 -1.2
583,225 + +0.8
583,276 + +0.8
583,305 + Dsui_0585 0.89 -2.6
583,313 - Dsui_0585 0.90 -0.2
583,318 + -0.2
583,364 + +0.8
583,374 - +0.8
583,437 - -1.6
583,597 + -1.8
583,599 + -1.6
583,607 - -0.8
583,649 - -0.2
583,695 - +0.8
583,734 - Dsui_0586 0.11 -1.6
583,800 - Dsui_0586 0.16 -0.8
583,807 - Dsui_0586 0.16 -0.8
584,094 - Dsui_0586 0.36 -0.2
584,237 + Dsui_0586 0.46 -1.2
584,311 + +0.8
584,365 - Dsui_0586 0.55 +0.8

Or see this region's nucleotide sequence