Strain Fitness in Dechlorosoma suillum PS around Dsui_0246

Experiment: ALP with copper (II) chloride 0.6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0244 and Dsui_0245 are separated by 1 nucleotidesDsui_0245 and Dsui_0246 overlap by 4 nucleotidesDsui_0246 and Dsui_0248 are separated by 844 nucleotides Dsui_0244: Dsui_0244 - cell division protein FtsL, at 244,990 to 245,259 _0244 Dsui_0245: Dsui_0245 - S-adenosyl-methyltransferase MraW, at 245,261 to 246,220 _0245 Dsui_0246: Dsui_0246 - mraZ protein, at 246,217 to 246,666 _0246 Dsui_0248: Dsui_0248 - Protein of unknown function (DUF3025), at 247,511 to 248,326 _0248 Position (kb) 246 247Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 245.453 kb on - strand, within Dsui_0245at 245.486 kb on - strand, within Dsui_0245at 245.552 kb on - strand, within Dsui_0245at 246.386 kb on - strand, within Dsui_0246at 246.527 kb on - strand, within Dsui_0246at 246.532 kb on - strand, within Dsui_0246at 246.538 kb on - strand, within Dsui_0246at 246.625 kb on - strandat 246.690 kb on - strandat 246.728 kb on - strandat 246.753 kb on - strandat 246.984 kb on + strandat 247.026 kb on - strandat 247.072 kb on - strandat 247.518 kb on + strandat 247.518 kb on + strandat 247.521 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with copper (II) chloride 0.6 mM
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245,453 - Dsui_0245 0.20 -2.6
245,486 - Dsui_0245 0.23 -1.6
245,552 - Dsui_0245 0.30 -2.6
246,386 - Dsui_0246 0.38 -5.8
246,527 - Dsui_0246 0.69 -0.7
246,532 - Dsui_0246 0.70 -1.9
246,538 - Dsui_0246 0.71 -1.7
246,625 - -1.6
246,690 - -4.5
246,728 - -1.2
246,753 - -0.8
246,984 + -0.8
247,026 - -1.7
247,072 - -1.2
247,518 + -0.2
247,518 + -2.1
247,521 - -1.8

Or see this region's nucleotide sequence