Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20880 and BWI76_RS20885 are separated by 77 nucleotides BWI76_RS20885 and BWI76_RS20890 are separated by 12 nucleotides
BWI76_RS20880: BWI76_RS20880 - esterase, at 4,365,816 to 4,366,514
_RS20880
BWI76_RS20885: BWI76_RS20885 - tRNA(Met) cytidine acetyltransferase TmcA, at 4,366,592 to 4,368,592
_RS20885
BWI76_RS20890: BWI76_RS20890 - neutral zinc metallopeptidase, at 4,368,605 to 4,369,474
_RS20890
Position (kb)
4366
4367
4368
4369 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4366.189 kb on - strand, within BWI76_RS20880 at 4366.394 kb on + strand, within BWI76_RS20880 at 4366.824 kb on - strand at 4366.831 kb on - strand, within BWI76_RS20885 at 4367.071 kb on + strand, within BWI76_RS20885 at 4367.079 kb on - strand, within BWI76_RS20885 at 4367.901 kb on + strand, within BWI76_RS20885 at 4367.909 kb on - strand, within BWI76_RS20885 at 4368.287 kb on + strand, within BWI76_RS20885 at 4368.300 kb on - strand, within BWI76_RS20885 at 4368.430 kb on + strand at 4368.438 kb on - strand at 4368.450 kb on - strand at 4368.470 kb on + strand at 4368.487 kb on - strand at 4368.632 kb on - strand at 4368.632 kb on - strand at 4368.806 kb on + strand, within BWI76_RS20890 at 4368.836 kb on - strand, within BWI76_RS20890 at 4368.978 kb on + strand, within BWI76_RS20890 at 4368.986 kb on - strand, within BWI76_RS20890 at 4368.986 kb on - strand, within BWI76_RS20890 at 4369.069 kb on - strand, within BWI76_RS20890 at 4369.071 kb on - strand, within BWI76_RS20890
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 4,366,189 - BWI76_RS20880 0.53 -0.1 4,366,394 + BWI76_RS20880 0.83 -0.6 4,366,824 - +3.0 4,366,831 - BWI76_RS20885 0.12 -0.4 4,367,071 + BWI76_RS20885 0.24 +0.5 4,367,079 - BWI76_RS20885 0.24 -1.4 4,367,901 + BWI76_RS20885 0.65 +1.4 4,367,909 - BWI76_RS20885 0.66 +0.5 4,368,287 + BWI76_RS20885 0.85 +1.5 4,368,300 - BWI76_RS20885 0.85 +0.5 4,368,430 + -3.3 4,368,438 - -0.3 4,368,450 - -1.6 4,368,470 + +0.3 4,368,487 - +0.3 4,368,632 - +0.0 4,368,632 - +1.2 4,368,806 + BWI76_RS20890 0.23 +0.4 4,368,836 - BWI76_RS20890 0.27 +0.2 4,368,978 + BWI76_RS20890 0.43 -0.2 4,368,986 - BWI76_RS20890 0.44 -0.0 4,368,986 - BWI76_RS20890 0.44 -0.1 4,369,069 - BWI76_RS20890 0.53 +1.4 4,369,071 - BWI76_RS20890 0.54 +1.0
Or see this region's nucleotide sequence