Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18395 and BWI76_RS18400 are separated by 107 nucleotides BWI76_RS18400 and BWI76_RS18405 are separated by 75 nucleotides BWI76_RS18405 and BWI76_RS18410 are separated by 183 nucleotides
BWI76_RS18395: BWI76_RS18395 - diguanylate cyclase, at 3,817,280 to 3,818,947
_RS18395
BWI76_RS18400: BWI76_RS18400 - DUF2158 domain-containing protein, at 3,819,055 to 3,819,234
_RS18400
BWI76_RS18405: BWI76_RS18405 - hypothetical protein, at 3,819,310 to 3,820,221
_RS18405
BWI76_RS18410: BWI76_RS18410 - drug/metabolite exporter YedA, at 3,820,405 to 3,821,316
_RS18410
Position (kb)
3819
3820
3821 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3818.316 kb on + strand, within BWI76_RS18395 at 3818.324 kb on - strand, within BWI76_RS18395 at 3818.508 kb on + strand, within BWI76_RS18395 at 3818.672 kb on - strand, within BWI76_RS18395 at 3818.672 kb on - strand, within BWI76_RS18395 at 3818.808 kb on - strand at 3819.140 kb on - strand, within BWI76_RS18400 at 3819.409 kb on - strand, within BWI76_RS18405 at 3819.476 kb on - strand, within BWI76_RS18405 at 3819.476 kb on - strand, within BWI76_RS18405 at 3819.476 kb on - strand, within BWI76_RS18405 at 3819.783 kb on + strand, within BWI76_RS18405 at 3820.064 kb on + strand, within BWI76_RS18405 at 3820.089 kb on + strand, within BWI76_RS18405 at 3820.089 kb on + strand, within BWI76_RS18405 at 3820.117 kb on + strand, within BWI76_RS18405 at 3820.198 kb on + strand at 3820.206 kb on - strand at 3820.390 kb on - strand at 3820.679 kb on + strand, within BWI76_RS18410 at 3820.848 kb on + strand, within BWI76_RS18410 at 3820.848 kb on + strand, within BWI76_RS18410 at 3820.848 kb on + strand, within BWI76_RS18410 at 3820.848 kb on + strand, within BWI76_RS18410 at 3821.203 kb on + strand, within BWI76_RS18410
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 3,818,316 + BWI76_RS18395 0.62 -0.0 3,818,324 - BWI76_RS18395 0.63 +0.3 3,818,508 + BWI76_RS18395 0.74 -0.3 3,818,672 - BWI76_RS18395 0.83 -0.3 3,818,672 - BWI76_RS18395 0.83 +1.2 3,818,808 - +0.3 3,819,140 - BWI76_RS18400 0.47 -0.4 3,819,409 - BWI76_RS18405 0.11 -0.0 3,819,476 - BWI76_RS18405 0.18 +0.4 3,819,476 - BWI76_RS18405 0.18 +2.2 3,819,476 - BWI76_RS18405 0.18 +0.2 3,819,783 + BWI76_RS18405 0.52 -0.4 3,820,064 + BWI76_RS18405 0.83 +0.3 3,820,089 + BWI76_RS18405 0.85 -0.0 3,820,089 + BWI76_RS18405 0.85 +0.6 3,820,117 + BWI76_RS18405 0.88 +1.0 3,820,198 + -0.7 3,820,206 - -0.5 3,820,390 - +0.7 3,820,679 + BWI76_RS18410 0.30 +2.0 3,820,848 + BWI76_RS18410 0.49 -0.1 3,820,848 + BWI76_RS18410 0.49 -0.1 3,820,848 + BWI76_RS18410 0.49 +0.1 3,820,848 + BWI76_RS18410 0.49 +0.2 3,821,203 + BWI76_RS18410 0.88 -1.9
Or see this region's nucleotide sequence