Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10070 and BWI76_RS10075 are separated by 267 nucleotides BWI76_RS10075 and BWI76_RS10080 are separated by 141 nucleotides BWI76_RS10080 and BWI76_RS10085 are separated by 561 nucleotides
BWI76_RS10070: BWI76_RS10070 - BAX inhibitor protein, at 2,131,823 to 2,132,482
_RS10070
BWI76_RS10075: BWI76_RS10075 - peptide ABC transporter substrate-binding protein, at 2,132,750 to 2,134,378
_RS10075
BWI76_RS10080: BWI76_RS10080 - tRNA-Ser, at 2,134,520 to 2,134,607
_RS10080
BWI76_RS10085: BWI76_RS10085 - hypothetical protein, at 2,135,169 to 2,135,396
_RS10085
Position (kb)
2132
2133
2134
2135 Strain fitness (log2 ratio)
-1
0
1 at 2132.155 kb on + strand, within BWI76_RS10070 at 2132.211 kb on - strand, within BWI76_RS10070 at 2132.355 kb on + strand, within BWI76_RS10070 at 2132.389 kb on + strand, within BWI76_RS10070 at 2132.551 kb on + strand at 2132.561 kb on + strand at 2132.561 kb on + strand at 2132.571 kb on + strand at 2132.707 kb on + strand at 2132.715 kb on - strand at 2132.715 kb on - strand at 2132.717 kb on + strand at 2132.717 kb on + strand at 2132.999 kb on - strand, within BWI76_RS10075 at 2133.201 kb on - strand, within BWI76_RS10075 at 2133.256 kb on - strand, within BWI76_RS10075 at 2133.258 kb on + strand, within BWI76_RS10075 at 2133.266 kb on - strand, within BWI76_RS10075 at 2133.762 kb on - strand, within BWI76_RS10075 at 2133.808 kb on + strand, within BWI76_RS10075 at 2133.881 kb on + strand, within BWI76_RS10075 at 2133.906 kb on + strand, within BWI76_RS10075 at 2134.305 kb on - strand at 2134.353 kb on + strand at 2134.363 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 2,132,155 + BWI76_RS10070 0.50 +0.2 2,132,211 - BWI76_RS10070 0.59 -1.5 2,132,355 + BWI76_RS10070 0.81 -0.2 2,132,389 + BWI76_RS10070 0.86 +0.1 2,132,551 + -0.6 2,132,561 + -0.8 2,132,561 + +0.1 2,132,571 + +0.5 2,132,707 + +0.0 2,132,715 - -0.9 2,132,715 - -0.4 2,132,717 + -0.6 2,132,717 + +0.2 2,132,999 - BWI76_RS10075 0.15 -0.1 2,133,201 - BWI76_RS10075 0.28 -0.6 2,133,256 - BWI76_RS10075 0.31 -1.0 2,133,258 + BWI76_RS10075 0.31 -0.2 2,133,266 - BWI76_RS10075 0.32 -0.5 2,133,762 - BWI76_RS10075 0.62 -0.4 2,133,808 + BWI76_RS10075 0.65 -0.5 2,133,881 + BWI76_RS10075 0.69 -0.6 2,133,906 + BWI76_RS10075 0.71 -0.2 2,134,305 - -0.1 2,134,353 + +0.5 2,134,363 - -1.2
Or see this region's nucleotide sequence