Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10075

Experiment: pyruvate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS10070 and BWI76_RS10075 are separated by 267 nucleotidesBWI76_RS10075 and BWI76_RS10080 are separated by 141 nucleotidesBWI76_RS10080 and BWI76_RS10085 are separated by 561 nucleotides BWI76_RS10070: BWI76_RS10070 - BAX inhibitor protein, at 2,131,823 to 2,132,482 _RS10070 BWI76_RS10075: BWI76_RS10075 - peptide ABC transporter substrate-binding protein, at 2,132,750 to 2,134,378 _RS10075 BWI76_RS10080: BWI76_RS10080 - tRNA-Ser, at 2,134,520 to 2,134,607 _RS10080 BWI76_RS10085: BWI76_RS10085 - hypothetical protein, at 2,135,169 to 2,135,396 _RS10085 Position (kb) 2132 2133 2134 2135Strain fitness (log2 ratio) -1 0 1at 2132.155 kb on + strand, within BWI76_RS10070at 2132.211 kb on - strand, within BWI76_RS10070at 2132.355 kb on + strand, within BWI76_RS10070at 2132.389 kb on + strand, within BWI76_RS10070at 2132.551 kb on + strandat 2132.561 kb on + strandat 2132.561 kb on + strandat 2132.571 kb on + strandat 2132.707 kb on + strandat 2132.715 kb on - strandat 2132.715 kb on - strandat 2132.717 kb on + strandat 2132.717 kb on + strandat 2132.999 kb on - strand, within BWI76_RS10075at 2133.201 kb on - strand, within BWI76_RS10075at 2133.256 kb on - strand, within BWI76_RS10075at 2133.258 kb on + strand, within BWI76_RS10075at 2133.266 kb on - strand, within BWI76_RS10075at 2133.762 kb on - strand, within BWI76_RS10075at 2133.808 kb on + strand, within BWI76_RS10075at 2133.881 kb on + strand, within BWI76_RS10075at 2133.906 kb on + strand, within BWI76_RS10075at 2134.305 kb on - strandat 2134.353 kb on + strandat 2134.363 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate (C)
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2,132,155 + BWI76_RS10070 0.50 +0.2
2,132,211 - BWI76_RS10070 0.59 -1.5
2,132,355 + BWI76_RS10070 0.81 -0.2
2,132,389 + BWI76_RS10070 0.86 +0.1
2,132,551 + -0.6
2,132,561 + -0.8
2,132,561 + +0.1
2,132,571 + +0.5
2,132,707 + +0.0
2,132,715 - -0.9
2,132,715 - -0.4
2,132,717 + -0.6
2,132,717 + +0.2
2,132,999 - BWI76_RS10075 0.15 -0.1
2,133,201 - BWI76_RS10075 0.28 -0.6
2,133,256 - BWI76_RS10075 0.31 -1.0
2,133,258 + BWI76_RS10075 0.31 -0.2
2,133,266 - BWI76_RS10075 0.32 -0.5
2,133,762 - BWI76_RS10075 0.62 -0.4
2,133,808 + BWI76_RS10075 0.65 -0.5
2,133,881 + BWI76_RS10075 0.69 -0.6
2,133,906 + BWI76_RS10075 0.71 -0.2
2,134,305 - -0.1
2,134,353 + +0.5
2,134,363 - -1.2

Or see this region's nucleotide sequence