Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37395

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,866,479	-		RR42_RS37385	0.81	+0.1
3,866,479	-		RR42_RS37385	0.81	+0.1
3,866,481	-		RR42_RS37385	0.81	-0.3
3,866,622	-				-0.5
3,866,661	-				-1.3
3,866,661	-				+0.4
3,866,779	+				+0.5
3,866,780	-				-0.1
3,866,780	-				+0.0
3,866,795	+				-1.0
3,866,842	+		RR42_RS37390	0.14	-0.8
3,866,843	-		RR42_RS37390	0.14	-0.7
3,866,884	+		RR42_RS37390	0.20	-0.3
3,867,127	+		RR42_RS37390	0.55	-0.2
3,867,286	+		RR42_RS37390	0.78	-2.1
3,867,286	+		RR42_RS37390	0.78	-1.4
3,867,286	+		RR42_RS37390	0.78	+0.7
3,867,287	-		RR42_RS37390	0.78	-0.9
3,867,287	-		RR42_RS37390	0.78	+2.1
3,867,393	+				-2.2
3,867,394	-				-0.7
3,867,465	+				+1.3
3,867,465	+				-0.3
3,867,465	+				+1.3
3,867,466	-				+0.8
3,867,466	-				-0.0
3,867,466	-				-0.9
3,867,588	-		RR42_RS37395	0.13	+0.3
3,867,588	-		RR42_RS37395	0.13	+0.0
3,867,609	-		RR42_RS37395	0.15	+0.2
3,867,609	-		RR42_RS37395	0.15	-0.1
3,867,609	-		RR42_RS37395	0.15	+0.7
3,867,701	+		RR42_RS37395	0.24	+0.1
3,868,000	-		RR42_RS37395	0.53	+0.3
3,868,349	+		RR42_RS37395	0.86	-0.1
3,868,349	+		RR42_RS37395	0.86	+0.8
3,868,350	-		RR42_RS37395	0.86	+0.0
3,868,350	-		RR42_RS37395	0.86	+0.6
3,868,393	-				-0.6
3,868,703	-		RR42_RS37400	0.30	+1.3
3,869,158	+				-0.1
3,869,158	+				-0.7
3,869,159	-				+0.9
3,869,159	-				-0.5
3,869,166	+				+2.7
3,869,166	+				+0.7
3,869,167	-				-0.3
3,869,167	-				-0.6
3,869,206	+				-0.1
3,869,206	+				+0.7
3,869,207	-				+0.1
3,869,207	-				-0.4
3,869,308	+				+0.6
3,869,308	+				+1.1
3,869,342	+				-0.6
3,869,342	+				-1.2
3,869,343	-				+0.1
3,869,343	-				-2.6
3,869,343	-				-0.6
3,869,343	-				+1.0
3,869,343	-				+0.3