Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36700

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,690,251	+		RR42_RS36695	0.69	-0.4
3,690,262	+		RR42_RS36695	0.69	-0.3
3,690,262	+		RR42_RS36695	0.69	-0.7
3,690,263	-		RR42_RS36695	0.69	+0.6
3,690,263	-		RR42_RS36695	0.69	-0.1
3,690,263	-		RR42_RS36695	0.69	-0.3
3,690,266	-		RR42_RS36695	0.69	+1.8
3,690,266	-		RR42_RS36695	0.69	-0.1
3,690,676	+		RR42_RS36695	0.82	+1.7
3,691,068	+				+0.7
3,691,069	-				+0.0
3,691,073	+				+0.6
3,691,073	+				-0.5
3,691,073	+				+1.0
3,691,073	+				+0.8
3,691,074	-				-0.2
3,691,074	-				+0.7
3,691,074	-				+0.6
3,691,212	-				+2.1
3,691,319	+				-0.4
3,691,613	+		RR42_RS36700	0.31	+0.3
3,691,815	+		RR42_RS36700	0.48	-0.3
3,691,816	-		RR42_RS36700	0.48	-0.5
3,691,816	-		RR42_RS36700	0.48	+0.5
3,692,001	-		RR42_RS36700	0.63	+0.7
3,692,001	-		RR42_RS36700	0.63	-0.5
3,692,001	-		RR42_RS36700	0.63	-0.3
3,692,437	+				+0.2
3,692,438	-				-1.0
3,692,460	+				+0.1
3,692,460	+				-0.4
3,692,461	-				-1.0
3,692,461	-				-0.6
3,692,499	+				+0.4
3,692,833	-		RR42_RS36705	0.25	-0.2
3,692,835	+		RR42_RS36705	0.25	-1.9
3,692,835	+		RR42_RS36705	0.25	+0.1
3,692,836	-		RR42_RS36705	0.25	+1.3
3,692,836	-		RR42_RS36705	0.25	-0.6
3,692,884	-		RR42_RS36705	0.29	+0.7
3,692,884	-		RR42_RS36705	0.29	+1.0
3,692,884	-		RR42_RS36705	0.29	+3.2
3,693,321	+		RR42_RS36705	0.61	+0.4
3,693,322	-		RR42_RS36705	0.61	-0.4
3,693,378	+		RR42_RS36705	0.66	-0.2
3,693,378	+		RR42_RS36705	0.66	+0.0
3,693,378	+		RR42_RS36705	0.66	+1.3
3,693,379	-		RR42_RS36705	0.66	+0.9
3,693,379	-		RR42_RS36705	0.66	+0.9
3,693,379	-		RR42_RS36705	0.66	-1.9