Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35680

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,454,824	+		RR42_RS35675	0.38	-0.5
3,454,825	-		RR42_RS35675	0.38	-1.1
3,454,825	-		RR42_RS35675	0.38	-0.1
3,454,825	-		RR42_RS35675	0.38	-0.2
3,454,825	-		RR42_RS35675	0.38	+0.1
3,454,881	+		RR42_RS35675	0.42	-0.3
3,454,925	+		RR42_RS35675	0.46	+0.3
3,454,925	+		RR42_RS35675	0.46	-2.5
3,454,925	+		RR42_RS35675	0.46	+0.3
3,455,020	-		RR42_RS35675	0.53	+1.9
3,455,020	-		RR42_RS35675	0.53	-1.3
3,455,020	-		RR42_RS35675	0.53	-1.0
3,455,020	-		RR42_RS35675	0.53	-0.1
3,455,020	-		RR42_RS35675	0.53	+1.3
3,455,127	+		RR42_RS35675	0.62	-0.9
3,455,127	+		RR42_RS35675	0.62	-1.8
3,455,241	+		RR42_RS35675	0.71	+0.9
3,455,241	+		RR42_RS35675	0.71	+1.3
3,455,242	-		RR42_RS35675	0.71	-0.2
3,455,242	-		RR42_RS35675	0.71	+0.5
3,455,242	-		RR42_RS35675	0.71	+0.0
3,455,242	-		RR42_RS35675	0.71	-0.2
3,455,242	-		RR42_RS35675	0.71	+0.6
3,455,410	-		RR42_RS35675	0.85	-0.3
3,455,516	+				-0.5
3,455,517	-				-0.3
3,455,568	+				-0.2
3,455,569	-				+0.4
3,455,654	+				+0.6
3,456,106	+		RR42_RS35680	0.25	+0.4
3,456,106	+		RR42_RS35680	0.25	-0.7
3,456,106	+		RR42_RS35680	0.25	+0.4
3,456,107	-		RR42_RS35680	0.25	+0.9
3,456,107	-		RR42_RS35680	0.25	-0.9
3,456,107	-		RR42_RS35680	0.25	+1.2
3,456,107	-		RR42_RS35680	0.25	-0.0
3,456,107	-		RR42_RS35680	0.25	-0.8
3,456,141	-		RR42_RS35680	0.27	-0.4
3,456,454	+		RR42_RS35680	0.43	+0.3
3,456,466	+		RR42_RS35680	0.44	+1.5
3,456,491	+		RR42_RS35680	0.45	+1.9
3,456,491	+		RR42_RS35680	0.45	-1.3
3,456,492	-		RR42_RS35680	0.45	+3.2
3,456,527	+		RR42_RS35680	0.47	+0.6
3,456,611	+		RR42_RS35680	0.51	-0.1
3,456,612	-		RR42_RS35680	0.51	+0.7
3,456,612	-		RR42_RS35680	0.51	+0.3
3,456,826	+		RR42_RS35680	0.62	+0.2
3,456,827	-		RR42_RS35680	0.62	+0.6
3,456,877	+		RR42_RS35680	0.65	-0.9
3,456,878	-		RR42_RS35680	0.65	+1.0
3,456,878	-		RR42_RS35680	0.65	-0.1
3,457,070	+		RR42_RS35680	0.75	+0.2
3,457,100	-		RR42_RS35680	0.77	-0.1
3,457,285	+		RR42_RS35680	0.86	+0.3
3,457,286	-		RR42_RS35680	0.86	-0.4
3,457,405	+				-1.6
3,457,405	+				+0.0
3,457,406	-				-0.3
3,457,473	-				-0.6
3,457,530	-				-1.4
3,457,549	+				-0.4
3,457,549	+				+0.8
3,457,668	+				+0.1
3,457,668	+				-1.4
3,457,668	+				+0.0
3,457,668	+				+0.5
3,457,668	+				-0.2
3,457,669	-				-0.9
3,457,669	-				-0.2
3,457,669	-				+1.6
3,457,669	-				+0.6
3,457,669	-				+0.8
3,457,669	-				+0.9
3,457,669	-				-0.1
3,457,684	+				+0.6
3,457,685	-				+0.8
3,457,698	-				+0.1
3,457,803	+				+1.0
3,457,936	-		RR42_RS35685	0.17	+0.8
3,458,204	-		RR42_RS35685	0.43	+1.4
3,458,274	+		RR42_RS35685	0.50	-2.0
3,458,275	-		RR42_RS35685	0.50	-3.2