Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34690

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,222,043	+		RR42_RS34685	0.25	+0.3
3,222,085	+		RR42_RS34685	0.30	+0.8
3,222,146	-		RR42_RS34685	0.37	+0.8
3,222,248	-		RR42_RS34685	0.48	-0.1
3,222,386	-		RR42_RS34685	0.64	+0.5
3,222,406	+		RR42_RS34685	0.67	+0.8
3,222,662	+				-0.8
3,222,663	-				-0.0
3,222,856	-				+0.4
3,222,856	-				+0.7
3,222,856	-				+1.0
3,222,862	+				-0.2
3,222,862	+				-0.9
3,222,862	+				-0.7
3,222,862	+				-0.2
3,222,863	-				+0.1
3,223,011	+		RR42_RS34690	0.15	+0.9
3,223,545	+		RR42_RS34690	0.89	-0.4
3,223,545	+		RR42_RS34690	0.89	-1.3
3,223,546	-		RR42_RS34690	0.89	-0.1
3,223,551	+				-0.7
3,223,551	+				+1.4
3,223,551	+				+0.3
3,223,551	+				+0.8
3,223,552	-				+0.2
3,223,566	+				-0.2
3,223,611	+				+0.6
3,223,612	-				+1.6
3,223,613	+				+0.0
3,223,613	+				-0.5
3,223,613	+				+0.6
3,223,613	+				-0.2
3,223,613	+				-0.4
3,223,613	+				-0.1
3,223,614	-				+0.2
3,223,614	-				+0.6
3,223,614	-				+0.3
3,223,614	-				+0.9
3,223,614	-				-1.3
3,223,614	-				-1.0
3,223,614	-				+1.0
3,223,614	-				-0.3
3,223,614	-				-0.4
3,223,614	-				-1.1
3,223,618	-				-0.4
3,223,732	+				+0.8
3,223,733	-				-0.5
3,223,734	+				+0.3
3,223,734	+				-1.5
3,223,735	-				-0.9
3,223,735	-				-1.4
3,223,885	-				-0.6
3,223,938	-				-0.1
3,223,938	-				-0.5
3,223,938	-				-1.4
3,223,938	-				-0.4
3,224,081	+		RR42_RS34695	0.18	+0.3
3,224,081	+		RR42_RS34695	0.18	-0.4
3,224,081	+		RR42_RS34695	0.18	-0.1
3,224,194	+		RR42_RS34695	0.33	-0.2
3,224,194	+		RR42_RS34695	0.33	-1.5
3,224,194	+		RR42_RS34695	0.33	+0.3
3,224,195	-		RR42_RS34695	0.33	+1.1
3,224,195	-		RR42_RS34695	0.33	-0.9
3,224,195	-		RR42_RS34695	0.33	-1.1
3,224,195	-		RR42_RS34695	0.33	-1.4
3,224,195	-		RR42_RS34695	0.33	-1.4
3,224,371	-		RR42_RS34695	0.56	+0.6
3,224,535	+		RR42_RS34695	0.78	-1.9
3,224,536	-		RR42_RS34695	0.78	+0.1
3,224,536	-		RR42_RS34695	0.78	+0.2
3,224,584	+		RR42_RS34695	0.85	-0.5