Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34070

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,072,057	+				+1.6
3,072,057	+				-1.6
3,072,058	-				-0.1
3,072,058	-				-0.1
3,072,058	-				-2.2
3,072,301	-		RR42_RS34065	0.30	-0.3
3,072,301	-		RR42_RS34065	0.30	-0.1
3,072,498	+		RR42_RS34065	0.50	-0.2
3,072,499	-		RR42_RS34065	0.50	-0.2
3,072,586	-		RR42_RS34065	0.59	+0.3
3,072,586	-		RR42_RS34065	0.59	+0.6
3,072,640	+		RR42_RS34065	0.64	+0.5
3,072,641	-		RR42_RS34065	0.64	+0.1
3,072,641	-		RR42_RS34065	0.64	-0.4
3,072,802	-		RR42_RS34065	0.81	-0.2
3,072,813	+		RR42_RS34065	0.82	-0.7
3,072,884	-		RR42_RS34065	0.89	+1.6
3,072,884	-		RR42_RS34065	0.89	-0.8
3,072,884	-		RR42_RS34065	0.89	-0.4
3,072,965	+				+1.2
3,073,020	-				+1.0
3,073,020	-				-0.5
3,073,025	-				+0.4
3,073,246	+		RR42_RS34070	0.20	-0.3
3,073,573	+		RR42_RS34070	0.52	-2.0
3,073,579	+		RR42_RS34070	0.53	+0.1
3,073,579	+		RR42_RS34070	0.53	+1.1
3,073,631	+		RR42_RS34070	0.58	+0.6
3,073,632	-		RR42_RS34070	0.58	+0.4
3,073,633	+		RR42_RS34070	0.58	-0.4
3,073,633	+		RR42_RS34070	0.58	-1.3
3,073,815	+		RR42_RS34070	0.76	+0.9
3,073,815	+		RR42_RS34070	0.76	+2.6
3,073,816	-		RR42_RS34070	0.77	+0.3
3,073,866	+		RR42_RS34070	0.82	-1.2
3,073,867	-		RR42_RS34070	0.82	+0.1
3,073,871	+		RR42_RS34070	0.82	+0.6
3,073,871	+		RR42_RS34070	0.82	-1.0
3,073,931	-		RR42_RS34070	0.88	-0.5
3,073,931	-		RR42_RS34070	0.88	-0.5
3,073,931	-		RR42_RS34070	0.88	-1.1
3,074,001	-				-0.4
3,074,069	-				-0.5
3,074,069	-				-1.0
3,074,069	-				+0.7
3,074,069	-				-0.2
3,074,147	-				+0.5
3,074,147	-				+0.9
3,074,223	+				-0.9
3,074,351	+				+0.4
3,074,351	+				-1.5
3,074,351	+				+0.2
3,074,352	-				+0.6
3,074,488	+		RR42_RS34075	0.38	-0.7
3,074,488	+		RR42_RS34075	0.38	+0.0
3,074,488	+		RR42_RS34075	0.38	-0.8
3,074,489	-		RR42_RS34075	0.38	+0.0
3,074,520	+		RR42_RS34075	0.46	-2.5
3,074,521	-		RR42_RS34075	0.46	-0.7
3,074,555	+		RR42_RS34075	0.55	+0.3
3,074,555	+		RR42_RS34075	0.55	+0.5
3,074,595	+		RR42_RS34075	0.66	+0.4
3,074,596	-		RR42_RS34075	0.66	-1.3
3,074,596	-		RR42_RS34075	0.66	+0.8
3,074,598	+		RR42_RS34075	0.67	-0.2
3,074,598	+		RR42_RS34075	0.67	-0.5
3,074,598	+		RR42_RS34075	0.67	-3.0
3,074,755	+				+0.3
3,074,877	-				-0.2
3,074,877	-				-0.5
3,074,877	-				-0.6
3,074,945	+		RR42_RS34080	0.16	+1.2
3,074,945	+		RR42_RS34080	0.16	-1.1
3,074,946	-		RR42_RS34080	0.16	-0.1
3,074,946	-		RR42_RS34080	0.16	+0.5
3,074,946	-		RR42_RS34080	0.16	+1.4