Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32705

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,731,461	+		RR42_RS32700	0.15	-0.0
2,731,461	+		RR42_RS32700	0.15	+2.6
2,731,462	-		RR42_RS32700	0.15	-0.4
2,731,462	-		RR42_RS32700	0.15	-0.3
2,731,641	-		RR42_RS32700	0.33	-0.5
2,731,672	-		RR42_RS32700	0.37	+0.0
2,732,050	-		RR42_RS32700	0.76	+0.5
2,732,055	+		RR42_RS32700	0.76	-0.5
2,732,258	+				+2.6
2,732,259	-				-0.8
2,732,280	+				-1.0
2,732,393	-				+1.3
2,732,393	-				+0.3
2,732,463	+				-0.6
2,732,464	-				-0.2
2,732,464	-				-0.2
2,732,559	+		RR42_RS32705	0.16	-0.9
2,732,601	-		RR42_RS32705	0.19	+0.1
2,732,601	-		RR42_RS32705	0.19	+1.0
2,732,670	+		RR42_RS32705	0.25	-1.0
2,732,671	-		RR42_RS32705	0.25	-0.9
2,732,671	-		RR42_RS32705	0.25	+0.8
2,732,694	+		RR42_RS32705	0.27	-1.4
2,732,695	-		RR42_RS32705	0.27	-0.1
2,732,695	-		RR42_RS32705	0.27	+2.3
2,732,742	+		RR42_RS32705	0.31	-0.9
2,732,742	+		RR42_RS32705	0.31	-1.0
2,732,743	-		RR42_RS32705	0.31	+0.1
2,732,778	+		RR42_RS32705	0.34	-0.1
2,732,796	+		RR42_RS32705	0.35	+1.9
2,732,976	+		RR42_RS32705	0.50	+0.4
2,733,037	-		RR42_RS32705	0.55	-0.1
2,733,178	+		RR42_RS32705	0.67	-1.3
2,733,178	+		RR42_RS32705	0.67	+0.2
2,733,178	+		RR42_RS32705	0.67	-1.4
2,733,403	+		RR42_RS32705	0.85	-0.9
2,733,504	-				+0.4
2,733,579	+				+1.0
2,733,579	+				-0.7
2,733,662	+				-0.1
2,733,663	-				-0.3
2,733,677	+				-1.4
2,733,678	-				-0.5
2,733,685	+				-0.2
2,733,685	+				-0.8
2,733,686	-				+0.1
2,733,686	-				+0.2
2,733,686	-				-0.0
2,733,846	+		RR42_RS32710	0.47	+0.7
2,733,847	-		RR42_RS32710	0.48	-1.0
2,734,072	+				-0.1
2,734,073	-				+0.8
2,734,084	+				-0.7
2,734,092	+				+0.7
2,734,093	-				-0.3
2,734,159	+				+1.2
2,734,216	+				-1.9
2,734,217	-				-1.1
2,734,489	+		RR42_RS32715	0.51	-1.3
2,734,490	-		RR42_RS32715	0.51	-0.4