Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32560

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,700,191	-		RR42_RS32555	0.56	-0.5
2,701,019	+		RR42_RS32560	0.12	+0.6
2,701,046	+		RR42_RS32560	0.14	+0.3
2,701,160	+		RR42_RS32560	0.25	-0.1
2,701,250	+		RR42_RS32560	0.33	-0.4
2,701,251	-		RR42_RS32560	0.33	-0.7
2,701,368	-		RR42_RS32560	0.44	-0.6
2,701,481	+		RR42_RS32560	0.54	-0.7
2,701,513	-		RR42_RS32560	0.57	+2.0
2,701,513	-		RR42_RS32560	0.57	-0.5
2,701,520	+		RR42_RS32560	0.58	+0.3
2,701,520	+		RR42_RS32560	0.58	+3.9
2,701,521	-		RR42_RS32560	0.58	-0.3
2,701,521	-		RR42_RS32560	0.58	+0.7
2,701,521	-		RR42_RS32560	0.58	+0.8
2,701,521	-		RR42_RS32560	0.58	-1.0
2,701,521	-		RR42_RS32560	0.58	-0.0
2,701,546	-		RR42_RS32560	0.60	+0.6
2,701,546	-		RR42_RS32560	0.60	+0.5
2,701,556	+		RR42_RS32560	0.61	-0.0
2,701,556	+		RR42_RS32560	0.61	+0.9
2,701,556	+		RR42_RS32560	0.61	-1.9
2,701,557	-		RR42_RS32560	0.61	+1.0
2,701,557	-		RR42_RS32560	0.61	+0.8
2,701,557	-		RR42_RS32560	0.61	+0.3
2,701,557	-		RR42_RS32560	0.61	-0.2
2,701,557	-		RR42_RS32560	0.61	+1.4
2,701,560	+		RR42_RS32560	0.61	-0.7
2,701,635	-		RR42_RS32560	0.68	-0.2
2,701,635	-		RR42_RS32560	0.68	+0.5
2,701,880	+				-0.3
2,701,880	+				+0.4
2,701,968	+				+0.1
2,701,968	+				-0.4
2,701,969	-				+0.7
2,701,969	-				-0.6
2,701,969	-				-1.9
2,701,969	-				+0.7
2,702,004	+				-0.3
2,702,005	-				+0.8
2,702,051	-				-0.5
2,702,062	+				+0.1
2,702,062	+				-1.3
2,702,062	+				-0.5
2,702,062	+				-1.5
2,702,063	-				-0.3
2,702,063	-				+0.6
2,702,063	-				-0.0
2,702,106	-				-0.3
2,702,187	+				+0.1
2,702,187	+				+1.6
2,702,187	+				-1.4
2,702,188	-				+0.1
2,702,190	+				-0.1
2,702,191	-				-0.2
2,702,191	-				-1.2
2,702,191	-				-0.4
2,702,334	+		RR42_RS32565	0.18	-0.1
2,702,334	+		RR42_RS32565	0.18	+0.2
2,702,334	+		RR42_RS32565	0.18	+0.4
2,702,335	-		RR42_RS32565	0.19	-0.0
2,702,404	+		RR42_RS32565	0.24	+0.7
2,702,405	-		RR42_RS32565	0.24	+1.0
2,702,405	-		RR42_RS32565	0.24	-2.1
2,702,405	-		RR42_RS32565	0.24	+0.3
2,702,616	+		RR42_RS32565	0.40	-1.1
2,702,616	+		RR42_RS32565	0.40	+1.4
2,702,617	-		RR42_RS32565	0.40	+0.6
2,702,663	-		RR42_RS32565	0.43	+0.4
2,702,747	-		RR42_RS32565	0.49	+2.1
2,702,913	+		RR42_RS32565	0.62	-0.6
2,702,914	-		RR42_RS32565	0.62	+0.6