Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31740

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,497,101	+		RR42_RS31735	0.12	+0.0
2,497,255	-		RR42_RS31735	0.32	-1.0
2,497,255	-		RR42_RS31735	0.32	-0.1
2,497,791	-				+0.6
2,497,849	+		RR42_RS31740	0.12	-0.6
2,497,849	+		RR42_RS31740	0.12	+0.4
2,497,850	-		RR42_RS31740	0.12	+0.9
2,497,850	-		RR42_RS31740	0.12	-1.2
2,497,871	-		RR42_RS31740	0.15	+0.9
2,497,948	-		RR42_RS31740	0.27	+1.8
2,497,948	-		RR42_RS31740	0.27	-0.5
2,498,132	-		RR42_RS31740	0.54	-1.1
2,498,282	-		RR42_RS31740	0.77	-0.5
2,498,282	-		RR42_RS31740	0.77	+0.3
2,498,455	-				+0.7
2,498,455	-				+0.4
2,498,455	-				-1.4
2,498,458	+				-0.7
2,498,458	+				-0.5
2,498,458	+				-1.2
2,498,458	+				-0.5
2,498,497	-				-0.2
2,498,581	-		RR42_RS31745	0.17	-0.5
2,498,637	+		RR42_RS31745	0.25	+0.2
2,498,637	+		RR42_RS31745	0.25	+1.3
2,498,637	+		RR42_RS31745	0.25	-0.2
2,498,638	-		RR42_RS31745	0.25	+0.1
2,498,638	-		RR42_RS31745	0.25	+1.7
2,498,746	-		RR42_RS31745	0.39	-0.1
2,498,746	-		RR42_RS31745	0.39	+0.4
2,498,746	-		RR42_RS31745	0.39	+1.1
2,498,793	-		RR42_RS31745	0.45	+2.6
2,498,793	-		RR42_RS31745	0.45	-0.7
2,498,821	+		RR42_RS31745	0.49	-1.0
2,498,874	+		RR42_RS31745	0.56	-0.8
2,498,875	-		RR42_RS31745	0.56	-1.6
2,498,919	+		RR42_RS31745	0.62	-0.7
2,498,919	+		RR42_RS31745	0.62	+0.6
2,498,919	+		RR42_RS31745	0.62	-1.3
2,498,919	+		RR42_RS31745	0.62	-0.0
2,498,920	-		RR42_RS31745	0.62	+0.9
2,498,920	-		RR42_RS31745	0.62	-0.1
2,499,218	+				-0.5
2,499,219	-				+0.2
2,499,222	+				-0.5
2,499,223	-				-1.4
2,499,241	+				+0.5
2,499,280	+				+0.3
2,499,280	+				+0.3
2,499,281	-				+0.3