Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31490

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,444,705	-				-0.7
2,444,753	-				-0.0
2,444,856	+				+0.5
2,444,889	+				+0.9
2,444,889	+				-1.8
2,444,890	-				+1.2
2,444,913	+				+0.4
2,444,914	-				+0.8
2,444,952	+				-0.1
2,444,953	-				-0.2
2,444,980	-				-2.1
2,444,980	-				-1.1
2,445,060	+		RR42_RS31485	0.32	-0.7
2,445,189	+		RR42_RS31485	0.69	-0.5
2,445,189	+		RR42_RS31485	0.69	-0.4
2,445,189	+		RR42_RS31485	0.69	+0.6
2,445,189	+		RR42_RS31485	0.69	-2.5
2,445,190	-		RR42_RS31485	0.69	-0.2
2,445,190	-		RR42_RS31485	0.69	+0.6
2,445,190	-		RR42_RS31485	0.69	+1.3
2,445,328	+				-0.1
2,445,329	-				-0.1
2,445,329	-				+0.2
2,445,329	-				+1.7
2,445,352	-				-0.2
2,445,393	+				-0.6
2,445,393	+				+0.0
2,445,394	-				-0.1
2,445,394	-				-0.1
2,445,414	+				-2.1
2,445,415	-				+0.5
2,445,434	+				+0.1
2,445,434	+				-1.8
2,445,435	-				-0.0
2,445,435	-				+0.2
2,445,435	-				-0.8
2,445,440	+				+0.0
2,445,441	-				+1.1
2,445,441	-				-0.8
2,445,696	-				+0.6
2,446,105	+		RR42_RS31490	0.78	+1.0
2,446,106	-		RR42_RS31490	0.78	-1.3
2,446,106	-		RR42_RS31490	0.78	-0.7
2,446,250	+				-0.4
2,446,250	+				-0.1
2,446,250	+				-0.7
2,446,250	+				-1.0
2,446,251	-				+1.4
2,446,251	-				-0.6
2,446,251	-				-0.7
2,446,257	-				-0.4
2,446,388	+		RR42_RS31495	0.60	+2.0
2,446,388	+		RR42_RS31495	0.60	+1.6
2,446,455	-		RR42_RS31495	0.89	-0.4
2,446,649	+				+2.1
2,446,649	+				+0.4
2,446,668	+				-0.7
2,446,668	+				-0.1
2,446,668	+				-0.7
2,446,669	-				-1.1
2,446,702	+				-0.2
2,446,703	-				-0.1
2,446,703	-				-0.3
2,446,703	-				-0.6
2,446,703	-				-0.9
2,446,703	-				+0.3
2,446,718	+				-0.8
2,446,718	+				-0.1
2,446,719	-				-0.7
2,446,719	-				+0.7
2,446,719	-				+0.2
2,446,983	+				-1.7
2,447,026	+				+0.9
2,447,027	-				+0.5
2,447,106	+				-0.2
2,447,106	+				-1.4
2,447,107	-				+0.2
2,447,107	-				+1.0
2,447,107	-				-1.3
2,447,144	-		RR42_RS31505	0.21	-1.4
2,447,199	+		RR42_RS31505	0.37	+0.8