Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31370

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,412,768	-		RR42_RS31365	0.37	-0.1
2,412,768	-		RR42_RS31365	0.37	+0.4
2,412,872	+		RR42_RS31365	0.45	-1.1
2,412,872	+		RR42_RS31365	0.45	-1.2
2,413,123	+		RR42_RS31365	0.66	-0.8
2,413,124	-		RR42_RS31365	0.66	+0.9
2,413,184	+		RR42_RS31365	0.71	+0.6
2,413,184	+		RR42_RS31365	0.71	-0.2
2,413,185	-		RR42_RS31365	0.71	+1.5
2,413,185	-		RR42_RS31365	0.71	-0.4
2,413,185	-		RR42_RS31365	0.71	-0.2
2,413,185	-		RR42_RS31365	0.71	-0.8
2,413,185	-		RR42_RS31365	0.71	+3.2
2,413,327	-		RR42_RS31365	0.82	-1.3
2,413,327	-		RR42_RS31365	0.82	-0.4
2,413,371	-		RR42_RS31365	0.86	+0.0
2,413,371	-		RR42_RS31365	0.86	+1.0
2,413,571	-				-0.8
2,413,576	+				+0.1
2,413,576	+				+0.5
2,413,576	+				+0.3
2,413,576	+				-1.0
2,413,576	+				-2.1
2,413,576	+				-1.1
2,413,577	-				+2.1
2,413,577	-				-0.0
2,413,577	-				-0.4
2,413,577	-				-0.2
2,413,628	+				+2.0
2,413,628	+				-0.9
2,413,629	-				-1.0
2,413,629	-				-0.1
2,413,629	-				-1.2
2,413,801	+		RR42_RS31370	0.13	-0.8
2,413,801	+		RR42_RS31370	0.13	+0.5
2,413,931	-		RR42_RS31370	0.21	+0.7
2,413,933	+		RR42_RS31370	0.21	-0.7
2,413,934	-		RR42_RS31370	0.21	-0.5
2,413,934	-		RR42_RS31370	0.21	+1.0
2,414,096	-		RR42_RS31370	0.30	-0.2
2,414,132	-		RR42_RS31370	0.32	-0.2
2,414,132	-		RR42_RS31370	0.32	-1.8
2,414,132	-		RR42_RS31370	0.32	+1.4
2,414,617	+		RR42_RS31370	0.60	+0.9
2,414,739	+		RR42_RS31370	0.67	-1.3
2,414,825	+		RR42_RS31370	0.72	-0.6
2,414,826	-		RR42_RS31370	0.72	+0.6
2,415,073	+		RR42_RS31370	0.86	-0.7
2,415,151	+				+0.2
2,415,155	+				+0.2
2,415,192	-				+0.8
2,415,570	-				+0.8
2,415,591	+				-1.3
2,415,771	+				+0.5
2,415,805	+				-0.5
2,415,806	-				+0.9
2,415,995	+		RR42_RS31375	0.17	+9.6
2,416,103	+		RR42_RS31375	0.25	-2.5
2,416,103	+		RR42_RS31375	0.25	-1.0
2,416,103	+		RR42_RS31375	0.25	-0.2
2,416,104	-		RR42_RS31375	0.25	-1.0
2,416,104	-		RR42_RS31375	0.25	-0.4
2,416,105	+		RR42_RS31375	0.26	+1.3
2,416,106	-		RR42_RS31375	0.26	+0.2
2,416,106	-		RR42_RS31375	0.26	-0.0
2,416,106	-		RR42_RS31375	0.26	+0.4
2,416,106	-		RR42_RS31375	0.26	+1.9
2,416,139	+		RR42_RS31375	0.28	+0.2
2,416,139	+		RR42_RS31375	0.28	-0.3
2,416,142	-		RR42_RS31375	0.29	-0.3