Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31270

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,389,127	+		RR42_RS31265	0.53	-1.0
2,389,147	-		RR42_RS31265	0.56	+1.7
2,389,286	+		RR42_RS31265	0.75	-0.0
2,389,286	+		RR42_RS31265	0.75	-0.4
2,389,286	+		RR42_RS31265	0.75	-1.4
2,389,287	-		RR42_RS31265	0.75	+1.4
2,389,427	-				-0.4
2,389,427	-				-1.6
2,389,427	-				+0.5
2,389,487	+				-0.2
2,389,488	-				+3.3
2,389,488	-				-0.0
2,389,750	-				-0.5
2,389,762	-				-0.6
2,389,830	+				+1.3
2,389,830	+				+0.1
2,389,831	-				+0.7
2,389,831	-				-0.6
2,389,831	-				+0.1
2,389,831	-				-0.4
2,389,920	+				-0.1
2,389,921	-				+1.6
2,389,972	-				+0.8
2,390,037	-				-0.0
2,390,094	+				-0.3
2,390,376	+		RR42_RS31270	0.22	+1.6
2,390,376	+		RR42_RS31270	0.22	+1.0
2,390,376	+		RR42_RS31270	0.22	+1.1
2,390,376	+		RR42_RS31270	0.22	+0.5
2,390,377	-		RR42_RS31270	0.22	-1.1
2,390,377	-		RR42_RS31270	0.22	+1.6
2,390,461	-		RR42_RS31270	0.29	+0.6
2,390,461	-		RR42_RS31270	0.29	-1.4
2,390,461	-		RR42_RS31270	0.29	+0.1
2,390,461	-		RR42_RS31270	0.29	-0.9
2,390,613	+		RR42_RS31270	0.41	+0.4
2,390,613	+		RR42_RS31270	0.41	-1.1
2,390,614	-		RR42_RS31270	0.41	-1.0
2,390,752	-		RR42_RS31270	0.52	-2.2
2,390,752	-		RR42_RS31270	0.52	+0.7
2,391,242	+				+1.6
2,391,280	-				-0.3
2,391,280	-				+2.2
2,391,510	+				+1.6
2,391,510	+				-0.2
2,391,511	-				-0.2
2,391,511	-				-0.1
2,391,513	+				+1.3
2,391,514	-				-1.4
2,391,547	-				-0.5
2,391,547	-				-0.6
2,391,622	+		RR42_RS31275	0.12	-0.4
2,391,729	+		RR42_RS31275	0.20	-0.6
2,391,730	-		RR42_RS31275	0.20	-1.3
2,391,928	+		RR42_RS31275	0.35	-1.0
2,391,929	-		RR42_RS31275	0.35	+0.6
2,391,954	+		RR42_RS31275	0.37	-0.2
2,391,963	+		RR42_RS31275	0.37	-0.7
2,391,964	-		RR42_RS31275	0.37	-0.0
2,392,071	+		RR42_RS31275	0.45	-0.2
2,392,071	+		RR42_RS31275	0.45	+0.4
2,392,072	-		RR42_RS31275	0.45	-0.1
2,392,072	-		RR42_RS31275	0.45	+1.2
2,392,072	-		RR42_RS31275	0.45	+0.2
2,392,161	+		RR42_RS31275	0.52	+0.2
2,392,161	+		RR42_RS31275	0.52	-1.0
2,392,162	-		RR42_RS31275	0.52	+1.2
2,392,174	+		RR42_RS31275	0.53	+0.0
2,392,175	-		RR42_RS31275	0.53	+1.0
2,392,175	-		RR42_RS31275	0.53	+0.6
2,392,175	-		RR42_RS31275	0.53	-1.2
2,392,176	+		RR42_RS31275	0.53	-0.0