Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31225

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,382,940	+		RR42_RS31225	0.16	-0.4
2,382,941	-		RR42_RS31225	0.16	-0.9
2,382,941	-		RR42_RS31225	0.16	-1.3
2,382,941	-		RR42_RS31225	0.16	-1.4
2,382,941	-		RR42_RS31225	0.16	+0.5
2,382,986	-		RR42_RS31225	0.26	-0.2
2,382,986	-		RR42_RS31225	0.26	-0.6
2,382,986	-		RR42_RS31225	0.26	+0.9
2,383,030	+		RR42_RS31225	0.36	-0.0
2,383,093	+		RR42_RS31225	0.50	-1.8
2,383,094	-		RR42_RS31225	0.50	-0.2
2,383,098	-		RR42_RS31225	0.51	+0.1
2,383,098	-		RR42_RS31225	0.51	+0.6
2,383,111	+		RR42_RS31225	0.54	+0.5
2,383,111	+		RR42_RS31225	0.54	+0.5
2,383,111	+		RR42_RS31225	0.54	-1.4
2,383,112	-		RR42_RS31225	0.54	+1.2
2,383,112	-		RR42_RS31225	0.54	-1.3
2,383,112	-		RR42_RS31225	0.54	-0.5
2,383,112	-		RR42_RS31225	0.54	+2.6
2,383,112	-		RR42_RS31225	0.54	-0.5
2,383,144	+		RR42_RS31225	0.61	+1.0
2,383,174	+		RR42_RS31225	0.68	-0.9
2,383,174	+		RR42_RS31225	0.68	-0.5
2,383,225	+		RR42_RS31225	0.79	+1.8
2,383,225	+		RR42_RS31225	0.79	+0.5
2,383,226	-		RR42_RS31225	0.79	-1.2
2,383,319	+				-0.6
2,383,320	-				+0.6
2,383,320	-				+0.5
2,383,421	+				+0.5
2,383,631	+		RR42_RS31230	0.23	+0.2
2,384,015	+		RR42_RS31230	0.63	-0.2
2,384,021	+		RR42_RS31230	0.64	-0.4
2,384,050	+		RR42_RS31230	0.67	+0.1
2,384,050	+		RR42_RS31230	0.67	+1.8
2,384,051	-		RR42_RS31230	0.67	-0.4
2,384,156	+		RR42_RS31230	0.78	-0.0
2,384,198	+		RR42_RS31230	0.82	-0.4
2,384,198	+		RR42_RS31230	0.82	-1.0
2,384,199	-		RR42_RS31230	0.82	+2.2
2,384,199	-		RR42_RS31230	0.82	-1.1
2,384,199	-		RR42_RS31230	0.82	-0.2
2,384,199	-		RR42_RS31230	0.82	-0.5
2,384,199	-		RR42_RS31230	0.82	-1.5
2,384,201	+		RR42_RS31230	0.83	+1.4
2,384,201	+		RR42_RS31230	0.83	-0.1
2,384,201	+		RR42_RS31230	0.83	-1.0
2,384,202	-		RR42_RS31230	0.83	-1.0
2,384,202	-		RR42_RS31230	0.83	-0.2
2,384,202	-		RR42_RS31230	0.83	+0.0
2,384,255	+		RR42_RS31230	0.88	-0.9
2,384,264	+		RR42_RS31230	0.89	-0.8
2,384,264	+		RR42_RS31230	0.89	+1.6
2,384,264	+		RR42_RS31230	0.89	-0.8
2,384,284	+				-1.6