Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31060

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,347,640	+		RR42_RS31055	0.52	+0.6
2,347,931	-		RR42_RS31055	0.83	-0.4
2,348,148	+				-0.5
2,348,253	+				+1.0
2,348,253	+				-0.4
2,348,253	+				+0.2
2,348,254	-				-1.1
2,348,254	-				-2.1
2,348,500	+		RR42_RS31060	0.21	+0.6
2,348,500	+		RR42_RS31060	0.21	+0.2
2,348,501	-		RR42_RS31060	0.21	+2.0
2,348,501	-		RR42_RS31060	0.21	+0.2
2,348,613	+		RR42_RS31060	0.28	-0.7
2,348,614	-		RR42_RS31060	0.28	+0.8
2,348,614	-		RR42_RS31060	0.28	+0.7
2,348,760	+		RR42_RS31060	0.37	+2.6
2,348,760	+		RR42_RS31060	0.37	-0.5
2,348,760	+		RR42_RS31060	0.37	-1.4
2,348,760	+		RR42_RS31060	0.37	-1.1
2,348,761	-		RR42_RS31060	0.37	+0.7
2,348,761	-		RR42_RS31060	0.37	+0.7
2,348,872	+		RR42_RS31060	0.44	+0.6
2,348,872	+		RR42_RS31060	0.44	+0.3
2,348,872	+		RR42_RS31060	0.44	-2.2
2,348,873	-		RR42_RS31060	0.44	-1.0
2,348,873	-		RR42_RS31060	0.44	-0.2
2,349,006	+				+1.6
2,349,041	+		RR42_RS31060	0.55	-0.7
2,349,041	+		RR42_RS31060	0.55	+0.9
2,349,071	+		RR42_RS31060	0.57	+1.0
2,349,149	-		RR42_RS31060	0.62	-1.0
2,349,168	+		RR42_RS31060	0.63	-0.1
2,349,168	+		RR42_RS31060	0.63	-0.3
2,349,169	-		RR42_RS31060	0.63	-0.4
2,349,169	-		RR42_RS31060	0.63	-0.0
2,349,293	-		RR42_RS31060	0.71	+0.6
2,349,298	+		RR42_RS31060	0.71	-1.6
2,349,323	-		RR42_RS31060	0.73	-0.2
2,349,323	-		RR42_RS31060	0.73	+0.6
2,349,425	+		RR42_RS31060	0.79	+0.2
2,349,520	+		RR42_RS31060	0.85	-0.4
2,349,520	+		RR42_RS31060	0.85	-0.2
2,349,521	-		RR42_RS31060	0.85	-0.3
2,349,537	-		RR42_RS31060	0.87	-1.7
2,349,537	-		RR42_RS31060	0.87	-0.6
2,349,537	-		RR42_RS31060	0.87	-1.3
2,349,553	-		RR42_RS31060	0.88	-0.7
2,349,553	-		RR42_RS31060	0.88	-0.2
2,349,615	+				+0.5
2,349,637	+				+1.9
2,349,637	+				-0.6
2,349,678	+				+0.4
2,349,740	+				+0.9
2,349,741	-				-0.3
2,349,741	-				-1.0
2,349,741	-				+0.3
2,349,775	+				+1.1
2,349,775	+				+0.2
2,349,988	-				+1.6
2,349,988	-				+0.0
2,349,997	+				-0.9
2,349,997	+				-0.3
2,349,998	-				-1.2
2,350,000	+				+0.3
2,350,000	+				-1.8
2,350,039	+				+0.9
2,350,039	+				-0.3
2,350,039	+				+0.4
2,350,040	-				+0.2
2,350,074	+		RR42_RS31065	0.11	+0.2
2,350,075	-		RR42_RS31065	0.11	+1.0
2,350,204	+				+2.6
2,350,421	-		RR42_RS31065	0.63	-1.4
2,350,661	+				+0.4
2,350,661	+				-1.1
2,350,676	+				-2.1
2,350,676	+				+1.8
2,350,676	+				+0.4