Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30355

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,183,121	+		RR42_RS30350	0.78	-0.0
2,183,123	+		RR42_RS30350	0.79	+0.0
2,183,124	-		RR42_RS30350	0.79	+1.0
2,183,443	+				+0.3
2,183,727	+		RR42_RS30355	0.13	-1.0
2,184,090	+		RR42_RS30355	0.34	-0.2
2,184,091	-		RR42_RS30355	0.34	-0.8
2,184,228	-		RR42_RS30355	0.42	-0.6
2,184,249	+		RR42_RS30355	0.44	+1.1
2,184,251	+		RR42_RS30355	0.44	+0.7
2,184,251	+		RR42_RS30355	0.44	-2.4
2,184,483	+		RR42_RS30355	0.58	+0.3
2,184,584	-		RR42_RS30355	0.64	-1.7
2,184,768	+		RR42_RS30355	0.75	-0.4
2,184,794	+		RR42_RS30355	0.76	+0.2
2,184,895	-		RR42_RS30355	0.82	-1.1
2,184,927	+		RR42_RS30355	0.84	+0.2
2,184,927	+		RR42_RS30355	0.84	-2.2
2,185,028	+				-0.6
2,185,079	+				+0.1
2,185,241	+				-0.3
2,185,241	+				-2.0
2,185,241	+				-0.8
2,185,242	-				-0.4
2,185,242	-				-0.1
2,185,242	-				-0.8
2,185,242	-				+0.0
2,185,242	-				-1.7
2,185,242	-				+0.2
2,185,323	+				+0.9
2,185,323	+				-1.0
2,185,324	-				-0.9
2,185,427	+		RR42_RS30360	0.19	-0.4
2,185,430	+		RR42_RS30360	0.20	+0.4
2,185,430	+		RR42_RS30360	0.20	+0.4
2,185,431	-		RR42_RS30360	0.20	-0.1
2,185,431	-		RR42_RS30360	0.20	-0.2
2,185,431	-		RR42_RS30360	0.20	-0.1
2,185,431	-		RR42_RS30360	0.20	+0.0
2,185,435	-		RR42_RS30360	0.21	+0.2
2,185,441	+		RR42_RS30360	0.22	-1.3
2,185,441	+		RR42_RS30360	0.22	+0.9
2,185,611	+		RR42_RS30360	0.49	-0.0
2,185,611	+		RR42_RS30360	0.49	-0.4
2,185,611	+		RR42_RS30360	0.49	-0.6
2,185,611	+		RR42_RS30360	0.49	+1.0
2,185,611	+		RR42_RS30360	0.49	-0.4
2,185,612	-		RR42_RS30360	0.49	+0.2
2,185,615	-		RR42_RS30360	0.50	+3.1
2,185,734	+		RR42_RS30360	0.69	-1.5
2,185,734	+		RR42_RS30360	0.69	-1.9
2,185,811	+		RR42_RS30360	0.81	-2.3
2,185,901	+				+0.1
2,185,989	-				-0.8
2,186,005	+				-0.5
2,186,006	-				+0.4
2,186,006	-				+0.7
2,186,006	-				-2.1
2,186,007	+				-0.0
2,186,008	-				-0.4
2,186,019	-				+1.0
2,186,086	+				-0.7
2,186,086	+				-1.1
2,186,086	+				-0.3
2,186,087	-				-0.0
2,186,123	-		RR42_RS30365	0.12	+0.6
2,186,123	-				+1.0
2,186,194	+		RR42_RS30365	0.18	-0.0