Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30160

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,139,233	-		RR42_RS30155	0.57	+1.3
2,139,293	+		RR42_RS30155	0.61	-3.0
2,139,301	+		RR42_RS30155	0.61	-0.8
2,139,301	+		RR42_RS30155	0.61	+0.2
2,139,553	+		RR42_RS30155	0.75	-0.4
2,139,575	-		RR42_RS30155	0.76	+0.3
2,139,616	+		RR42_RS30155	0.79	+1.2
2,139,617	-		RR42_RS30155	0.79	+0.0
2,139,617	-		RR42_RS30155	0.79	-1.9
2,139,669	+		RR42_RS30155	0.82	+1.2
2,139,718	+		RR42_RS30155	0.84	-0.1
2,139,773	-		RR42_RS30155	0.87	+0.3
2,139,784	+		RR42_RS30155	0.88	+0.6
2,139,784	+		RR42_RS30155	0.88	-0.4
2,139,785	-		RR42_RS30155	0.88	+1.2
2,139,815	+		RR42_RS30155	0.90	-0.3
2,139,816	-		RR42_RS30155	0.90	+1.3
2,139,844	+				-0.2
2,140,055	+				+0.4
2,140,055	+				+1.0
2,140,056	-				+0.5
2,140,076	-				-0.0
2,140,313	-		RR42_RS30160	0.14	-1.8
2,140,510	+		RR42_RS30160	0.30	+0.7
2,140,510	+		RR42_RS30160	0.30	+1.3
2,140,511	-		RR42_RS30160	0.30	+0.5
2,140,520	-		RR42_RS30160	0.31	-0.6
2,140,666	+		RR42_RS30160	0.43	-1.4
2,140,666	+		RR42_RS30160	0.43	+0.1
2,140,666	+		RR42_RS30160	0.43	-0.4
2,140,666	+		RR42_RS30160	0.43	+0.5
2,140,667	-		RR42_RS30160	0.43	+0.1
2,140,667	-		RR42_RS30160	0.43	-0.6
2,140,667	-		RR42_RS30160	0.43	-0.6
2,140,748	-		RR42_RS30160	0.50	-0.4
2,140,871	-		RR42_RS30160	0.60	-0.2
2,141,014	+		RR42_RS30160	0.72	-0.7
2,141,014	+		RR42_RS30160	0.72	-1.2
2,141,015	-		RR42_RS30160	0.72	+0.9
2,141,454	-				+1.2
2,141,454	-				+0.3
2,141,507	+				+0.4
2,141,508	-				-0.2
2,141,508	-				-0.0
2,141,526	-				+1.2
2,141,581	+				+1.6
2,141,582	-				+0.4
2,141,645	+		RR42_RS30165	0.10	+1.3
2,141,646	-		RR42_RS30165	0.10	+0.4
2,141,646	-		RR42_RS30165	0.10	-0.3
2,141,660	+		RR42_RS30165	0.11	+0.7
2,141,660	+		RR42_RS30165	0.11	-0.3
2,141,774	+		RR42_RS30165	0.21	-0.6
2,141,774	+		RR42_RS30165	0.21	-0.1
2,141,774	+		RR42_RS30165	0.21	+0.2
2,141,775	-		RR42_RS30165	0.21	+0.2
2,141,775	-		RR42_RS30165	0.21	+0.3
2,141,775	-		RR42_RS30165	0.21	+0.1
2,141,775	-		RR42_RS30165	0.21	+1.1
2,141,778	-		RR42_RS30165	0.21	+3.0
2,141,924	+		RR42_RS30165	0.33	-0.8
2,141,924	+		RR42_RS30165	0.33	+1.4
2,141,925	-		RR42_RS30165	0.34	-0.3
2,141,925	-		RR42_RS30165	0.34	-0.3
2,142,029	+		RR42_RS30165	0.42	+0.1
2,142,029	+		RR42_RS30165	0.42	-0.6
2,142,030	-		RR42_RS30165	0.42	+0.6
2,142,054	+		RR42_RS30165	0.44	-1.1
2,142,055	-		RR42_RS30165	0.44	-0.1
2,142,143	+		RR42_RS30165	0.52	-0.1
2,142,144	-		RR42_RS30165	0.52	-0.4
2,142,182	+		RR42_RS30165	0.55	-0.1
2,142,294	-		RR42_RS30165	0.64	+0.5
2,142,294	-		RR42_RS30165	0.64	+1.6
2,142,294	-		RR42_RS30165	0.64	+1.2
2,142,294	-		RR42_RS30165	0.64	-0.0