Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30085

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,120,824	-		RR42_RS30080	0.36	-1.0
2,120,824	-		RR42_RS30080	0.36	-0.9
2,120,824	-		RR42_RS30080	0.36	+1.0
2,121,083	-		RR42_RS30080	0.55	+0.6
2,121,105	+		RR42_RS30080	0.57	+0.1
2,121,106	-		RR42_RS30080	0.57	-2.1
2,121,128	+		RR42_RS30080	0.58	-0.7
2,121,141	+		RR42_RS30080	0.59	+1.7
2,121,141	+		RR42_RS30080	0.59	+1.0
2,121,141	+		RR42_RS30080	0.59	+1.0
2,121,229	-		RR42_RS30080	0.66	-0.5
2,121,229	-		RR42_RS30080	0.66	-1.6
2,121,229	-		RR42_RS30080	0.66	+0.6
2,121,278	+		RR42_RS30080	0.69	-0.0
2,121,283	+		RR42_RS30080	0.69	+0.1
2,121,283	+		RR42_RS30080	0.69	-0.1
2,121,283	+		RR42_RS30080	0.69	-0.2
2,121,284	-		RR42_RS30080	0.69	+0.1
2,121,284	-		RR42_RS30080	0.69	-1.9
2,121,284	-		RR42_RS30080	0.69	+0.4
2,121,318	-		RR42_RS30080	0.72	-0.2
2,121,452	-		RR42_RS30080	0.82	-1.0
2,121,524	+		RR42_RS30080	0.87	-0.3
2,121,528	-		RR42_RS30080	0.87	-0.6
2,121,528	-		RR42_RS30080	0.87	-1.0
2,121,620	+				-1.0
2,121,651	+				+1.2
2,121,775	+		RR42_RS30085	0.14	-0.8
2,121,776	-		RR42_RS30085	0.14	-0.8
2,121,940	+		RR42_RS30085	0.59	-1.0
2,121,941	-		RR42_RS30085	0.59	+0.5
2,121,941	-		RR42_RS30085	0.59	-1.5
2,122,083	+				+0.5
2,122,084	-				+0.1
2,122,084	-				-0.6
2,122,084	-				-0.4
2,122,109	-				-1.3
2,122,119	+				-0.9
2,122,119	+				-1.0
2,122,120	-				+0.0
2,122,123	+				-0.4
2,122,162	+				+1.3
2,122,239	-				+0.4
2,122,239	-				-1.8
2,122,374	-				-2.5
2,122,527	-				+0.2
2,122,535	-				+0.1
2,122,861	+		RR42_RS30090	0.23	-0.4
2,123,062	-		RR42_RS30090	0.39	+1.4