Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29290

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,922,157	+		RR42_RS29275	0.81	+0.3
1,922,157	+		RR42_RS29275	0.81	+0.6
1,922,157	+		RR42_RS29275	0.81	+0.2
1,922,186	-		RR42_RS29275	0.84	+0.1
1,922,265	+				+1.0
1,922,266	-				-1.0
1,922,310	+				-0.7
1,922,310	+				+0.6
1,922,364	+				-0.0
1,922,364	+				-0.1
1,922,364	+				-0.7
1,922,365	-				-0.2
1,922,365	-				-0.4
1,922,365	-				+2.6
1,922,365	-				+0.1
1,922,365	-				+0.4
1,922,365	-				-0.5
1,922,470	+		RR42_RS29280	0.38	-2.8
1,922,618	-				+2.8
1,922,704	+		RR42_RS29285	0.21	+1.0
1,922,857	+		RR42_RS29285	0.57	+0.6
1,922,857	+		RR42_RS29285	0.57	-0.8
1,922,857	+		RR42_RS29285	0.57	-0.6
1,922,858	-		RR42_RS29285	0.57	+0.6
1,922,920	+		RR42_RS29285	0.71	-2.0
1,923,035	+				+0.9
1,923,080	+				+1.2
1,923,080	+				+0.7
1,923,081	-				-0.2
1,923,082	+				-0.4
1,923,082	+				-0.7
1,923,082	+				+0.2
1,923,083	-				+2.0
1,923,083	-				-0.6
1,923,083	-				+0.0
1,923,083	-				-0.8
1,923,174	+				-1.4
1,923,174	+				+0.5
1,923,174	+				+0.6
1,923,174	+				+2.6
1,923,175	-				-0.3
1,923,175	-				-0.1
1,923,175	-				+1.6
1,923,175	-				-0.2
1,923,175	-				+2.2
1,923,756	-		RR42_RS29290	0.64	+0.3
1,923,771	+		RR42_RS29290	0.65	-0.0
1,924,045	+				-2.0
1,924,046	-				-0.3
1,924,120	+				+0.4
1,924,121	-				+0.5
1,924,133	+				+0.8
1,924,185	+				-2.1
1,924,186	-				-1.2
1,924,209	+				-0.6
1,924,209	+				-1.0
1,924,210	-				+0.5
1,924,362	+		RR42_RS29295	0.23	-0.6
1,924,362	+		RR42_RS29295	0.23	+0.6
1,924,363	-		RR42_RS29295	0.23	+0.8
1,924,534	+		RR42_RS29295	0.64	-0.6
1,924,616	+		RR42_RS29295	0.83	+0.6
1,924,616	+		RR42_RS29295	0.83	+1.6
1,924,617	-		RR42_RS29295	0.84	+0.0
1,924,737	+				-0.6
1,924,737	+				-1.6
1,924,738	-				-0.8
1,924,769	-				-1.2
1,924,769	-				+1.4
1,924,800	+				-0.6
1,924,800	+				-0.6
1,924,801	-				+0.6
1,924,880	+				-0.9
1,924,881	-				-1.2
1,924,884	+				-0.7
1,924,907	-				-0.2
1,924,915	+				+0.6
1,925,084	+				-1.1
1,925,085	-				+0.8
1,925,085	-				+1.1