Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28455

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,742,465	+		RR42_RS28450	0.44	-1.0
1,742,507	+		RR42_RS28450	0.47	-0.6
1,742,508	-		RR42_RS28450	0.47	+0.5
1,742,562	-		RR42_RS28450	0.51	-0.9
1,742,640	+		RR42_RS28450	0.56	+0.8
1,742,640	+		RR42_RS28450	0.56	+0.5
1,742,640	+		RR42_RS28450	0.56	+0.6
1,742,640	+		RR42_RS28450	0.56	-0.7
1,742,640	+		RR42_RS28450	0.56	-0.4
1,742,641	-		RR42_RS28450	0.57	-0.1
1,742,641	-		RR42_RS28450	0.57	-1.2
1,742,641	-		RR42_RS28450	0.57	-0.8
1,742,641	-		RR42_RS28450	0.57	+0.8
1,742,641	-		RR42_RS28450	0.57	-0.1
1,742,771	+		RR42_RS28450	0.66	-0.4
1,742,771	+		RR42_RS28450	0.66	+0.6
1,742,771	+		RR42_RS28450	0.66	+2.6
1,743,079	-		RR42_RS28450	0.88	-0.6
1,743,248	+				+0.3
1,743,249	-				+0.4
1,743,312	+				-0.1
1,743,312	+				-0.4
1,743,312	+				+0.0
1,743,365	+				-0.9
1,743,379	+				+0.8
1,743,380	-				+1.2
1,743,380	-				-1.1
1,743,380	-				-0.1
1,743,407	+				+0.5
1,743,408	-				-0.2
1,743,890	+		RR42_RS28455	0.48	+0.4
1,744,204	+		RR42_RS28455	0.79	-0.5
1,744,204	+		RR42_RS28455	0.79	-0.7
1,744,204	+		RR42_RS28455	0.79	-2.1
1,744,262	+		RR42_RS28455	0.85	-0.1
1,744,427	+				+0.3
1,744,427	+				+0.8
1,744,428	-				-1.5
1,744,450	+				+1.0
1,744,451	-				-1.3
1,744,451	-				-0.9
1,744,451	-				+1.9
1,744,832	+		RR42_RS28460	0.47	-1.7
1,744,833	-		RR42_RS28460	0.47	+0.8
1,745,026	+		RR42_RS28460	0.72	-0.4
1,745,026	+		RR42_RS28460	0.72	+0.8
1,745,026	+		RR42_RS28460	0.72	-0.2
1,745,027	-		RR42_RS28460	0.72	-0.4
1,745,027	-		RR42_RS28460	0.72	+0.0
1,745,027	-		RR42_RS28460	0.72	-0.1
1,745,122	+		RR42_RS28460	0.85	-0.3
1,745,123	-		RR42_RS28460	0.85	-1.8