Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28425

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,735,533	+		RR42_RS28415	0.54	-1.1
1,735,533	+		RR42_RS28415	0.54	-0.8
1,735,608	+		RR42_RS28415	0.66	+1.3
1,735,609	-		RR42_RS28415	0.66	+0.8
1,736,048	+		RR42_RS28420	0.32	+0.3
1,736,048	+		RR42_RS28420	0.32	-0.3
1,736,049	-		RR42_RS28420	0.32	+0.7
1,736,049	-		RR42_RS28420	0.32	-1.1
1,736,049	-		RR42_RS28420	0.32	+0.8
1,736,278	+		RR42_RS28420	0.67	-0.1
1,736,299	-		RR42_RS28420	0.70	-1.4
1,736,369	+		RR42_RS28420	0.80	+0.3
1,736,370	-		RR42_RS28420	0.80	-0.2
1,736,405	+		RR42_RS28420	0.86	+2.9
1,736,405	+		RR42_RS28420	0.86	-0.5
1,736,485	+				+0.9
1,736,578	-				+0.9
1,736,929	+		RR42_RS28425	0.54	-1.0
1,736,950	+		RR42_RS28425	0.56	-1.6
1,736,951	-		RR42_RS28425	0.57	-0.4
1,737,317	-				-0.9
1,737,342	-				-1.2
1,737,697	-				+1.2
1,737,697	-				+0.0
1,738,091	+		RR42_RS28435	0.12	+0.6
1,738,091	+		RR42_RS28435	0.12	+3.2
1,738,091	+		RR42_RS28435	0.12	+0.1
1,738,092	-		RR42_RS28435	0.12	+0.9
1,738,092	-		RR42_RS28435	0.12	+0.6
1,738,201	+		RR42_RS28435	0.19	+0.1
1,738,201	+		RR42_RS28435	0.19	+0.7
1,738,202	-		RR42_RS28435	0.19	-0.2
1,738,202	-		RR42_RS28435	0.19	-0.8
1,738,202	-		RR42_RS28435	0.19	+0.6
1,738,202	-		RR42_RS28435	0.19	+0.4
1,738,225	+		RR42_RS28435	0.20	+0.4
1,738,225	+		RR42_RS28435	0.20	+0.2