Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28205

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,682,701	-		RR42_RS28195	0.78	-0.2
1,682,798	+		RR42_RS28195	0.89	+0.3
1,682,799	+		RR42_RS28195	0.89	-1.5
1,682,799	+		RR42_RS28195	0.89	-0.6
1,682,908	+				-0.6
1,682,909	-				+0.4
1,683,121	+		RR42_RS28200	0.44	-0.2
1,683,156	-		RR42_RS28200	0.51	+0.1
1,683,285	+		RR42_RS28200	0.76	-0.7
1,683,285	+		RR42_RS28200	0.76	-1.0
1,683,286	-		RR42_RS28200	0.76	+2.6
1,683,315	+		RR42_RS28200	0.81	+0.2
1,683,316	-		RR42_RS28200	0.82	-0.5
1,683,352	+		RR42_RS28200	0.89	+0.4
1,683,503	+				-0.1
1,683,504	-				+0.4
1,683,508	+				-0.4
1,683,510	+				-1.4
1,683,511	-				-0.4
1,683,549	+				+0.2
1,683,580	-				-1.3
1,683,688	-				-1.0
1,683,751	+				-1.3
1,683,751	+				-0.7
1,683,769	+				+1.6
1,683,822	+		RR42_RS28205	0.11	+0.0
1,683,880	+		RR42_RS28205	0.14	+0.8
1,684,417	+		RR42_RS28205	0.39	+1.4
1,684,417	+		RR42_RS28205	0.39	-0.4
1,684,430	-		RR42_RS28205	0.40	+0.3
1,684,430	-		RR42_RS28205	0.40	-0.3
1,684,488	+		RR42_RS28205	0.42	-0.1
1,684,690	-		RR42_RS28205	0.52	-1.2
1,684,690	-		RR42_RS28205	0.52	-0.7
1,684,786	+		RR42_RS28205	0.56	-1.6
1,684,940	+		RR42_RS28205	0.64	-0.4
1,684,966	+		RR42_RS28205	0.65	+0.0
1,684,967	-		RR42_RS28205	0.65	-1.1
1,684,970	-		RR42_RS28205	0.65	+1.0
1,684,972	+		RR42_RS28205	0.65	-0.5
1,684,972	+		RR42_RS28205	0.65	-1.0
1,684,973	-		RR42_RS28205	0.65	-1.4
1,685,014	+		RR42_RS28205	0.67	+1.4
1,685,229	+		RR42_RS28205	0.77	-0.7
1,685,229	+		RR42_RS28205	0.77	-1.2
1,685,229	+		RR42_RS28205	0.77	+0.7
1,685,252	-		RR42_RS28205	0.78	+0.5
1,685,263	+		RR42_RS28205	0.79	-0.5
1,685,299	+		RR42_RS28205	0.80	-0.1
1,685,300	-		RR42_RS28205	0.80	+0.4
1,685,347	+		RR42_RS28205	0.83	-0.3
1,685,347	+		RR42_RS28205	0.83	-0.2
1,685,347	+		RR42_RS28205	0.83	-0.9
1,685,348	-		RR42_RS28205	0.83	+0.4
1,685,362	+		RR42_RS28205	0.83	-1.0
1,685,363	-		RR42_RS28205	0.83	-1.5
1,685,515	+				+0.8
1,685,516	-				+1.2
1,685,587	+				-0.3
1,685,891	+		RR42_RS28210	0.13	-0.4
1,685,891	+		RR42_RS28210	0.13	-0.1
1,685,892	-		RR42_RS28210	0.13	+0.7
1,685,892	-		RR42_RS28210	0.13	-0.1
1,685,892	-		RR42_RS28210	0.13	+0.6
1,685,892	-		RR42_RS28210	0.13	+0.2
1,686,119	+		RR42_RS28210	0.37	-0.2
1,686,126	-		RR42_RS28210	0.38	+0.2
1,686,126	-		RR42_RS28210	0.38	+1.3
1,686,129	+		RR42_RS28210	0.38	+0.8
1,686,130	-		RR42_RS28210	0.39	+0.8
1,686,130	-		RR42_RS28210	0.39	-0.2
1,686,130	-		RR42_RS28210	0.39	+0.1
1,686,188	+		RR42_RS28210	0.45	-0.6
1,686,188	+		RR42_RS28210	0.45	-2.6
1,686,188	+		RR42_RS28210	0.45	+1.0
1,686,189	-		RR42_RS28210	0.45	-1.0
1,686,189	-		RR42_RS28210	0.45	+0.0
1,686,189	-		RR42_RS28210	0.45	-0.4