Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27560

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,548,613	+				+0.9
1,548,614	-				+1.4
1,548,614	-				+1.1
1,548,695	-				+0.8
1,549,001	+				-0.2
1,549,079	-				-0.5
1,549,158	+				+1.9
1,549,160	+				-1.6
1,549,160	+				-0.3
1,549,161	-				-0.1
1,549,161	-				-0.6
1,549,161	-				-0.3
1,549,161	-				-0.7
1,549,161	-				+0.7
1,549,203	+				+0.7
1,549,203	+				-0.1
1,549,203	+				-0.3
1,549,204	-				+0.6
1,549,242	+				-0.4
1,549,242	+				+0.0
1,549,548	+				+0.0
1,549,549	-				-0.1
1,549,549	-				-1.0
1,549,621	+				-1.1
1,549,621	+				-0.8
1,549,621	+				-1.4
1,549,622	-				-1.0
1,549,622	-				+0.2
1,549,622	-				-1.2
1,549,864	+		RR42_RS27560	0.36	+1.1
1,549,864	+		RR42_RS27560	0.36	+1.2
1,549,864	+		RR42_RS27560	0.36	-0.5
1,549,864	+		RR42_RS27560	0.36	-1.3
1,549,865	-		RR42_RS27560	0.36	-0.4
1,549,941	+		RR42_RS27560	0.44	+0.2
1,550,095	+		RR42_RS27560	0.61	+0.1
1,550,096	-		RR42_RS27560	0.61	+0.0
1,550,420	-				-0.4
1,550,420	-				+0.4
1,550,420	-				+0.2
1,550,525	-				-0.5
1,550,526	+				+0.4
1,550,545	+				-0.8
1,550,545	+				-0.3
1,550,546	-				-0.7
1,550,546	-				+0.0
1,550,551	-				-1.0
1,550,551	-				-0.8
1,550,582	-				-1.9
1,550,582	-				+0.7
1,550,582	-				+0.5
1,550,619	+				+0.3
1,550,620	-				+1.4
1,550,625	+				+0.6
1,550,626	-				-0.5
1,550,626	-				-0.5
1,550,936	-		RR42_RS27565	0.62	+1.1
1,551,143	+				-0.3
1,551,144	-				-0.2
1,551,144	-				+1.3
1,551,146	+				+0.1
1,551,146	+				-0.4
1,551,147	-				+0.9
1,551,147	-				-0.3
1,551,164	+		RR42_RS27570	0.10	-2.0
1,551,165	-		RR42_RS27570	0.11	+0.4
1,551,165	-		RR42_RS27570	0.11	+1.7
1,551,261	-		RR42_RS27570	0.24	-0.0