Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27375

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,492,441	+		RR42_RS27365	0.32	+0.7
1,492,441	+		RR42_RS27365	0.32	-0.3
1,492,442	-		RR42_RS27365	0.33	-1.2
1,492,447	+		RR42_RS27365	0.34	+0.7
1,492,473	-		RR42_RS27365	0.39	+1.7
1,492,473	-		RR42_RS27365	0.39	-0.9
1,492,481	-		RR42_RS27365	0.40	-0.4
1,492,654	+		RR42_RS27365	0.73	-1.3
1,492,700	-				+2.7
1,492,721	-		RR42_RS27365	0.86	-1.2
1,492,758	+				-1.1
1,492,758	+				+0.3
1,492,758	+				-0.3
1,492,759	-				-1.8
1,492,759	-				+1.7
1,492,883	+				+1.7
1,492,885	+				+0.7
1,492,886	-		RR42_RS27370	0.10	+0.9
1,492,886	-		RR42_RS27370	0.10	-0.4
1,492,886	-		RR42_RS27370	0.10	-0.8
1,493,188	-				+0.1
1,493,188	-				-0.9
1,493,188	-				-1.0
1,493,251	+				+1.4
1,493,371	+				+0.2
1,493,371	+				-0.5
1,493,371	+				-0.3
1,493,372	-				-1.1
1,493,372	-				+0.3
1,493,372	-				+0.5
1,493,381	-				+0.4
1,493,381	-				+0.3
1,493,393	-				+0.5
1,493,607	+		RR42_RS27375	0.42	+1.7
1,493,607	+		RR42_RS27375	0.42	-0.2
1,493,607	+		RR42_RS27375	0.42	-1.9
1,493,608	-		RR42_RS27375	0.43	-1.7
1,493,842	+		RR42_RS27375	0.80	-0.3
1,493,843	-		RR42_RS27375	0.80	-0.4
1,493,914	+				+1.2
1,493,915	-				-0.4
1,494,308	+		RR42_RS27380	0.23	+0.8
1,494,309	-		RR42_RS27380	0.23	-1.5
1,494,409	-		RR42_RS27380	0.31	-0.8
1,494,891	-		RR42_RS27380	0.68	-0.6