Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26015

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,181,755	+				+0.2
1,181,755	+				+0.5
1,181,896	+				+1.6
1,181,897	-				-0.7
1,182,010	+				-0.4
1,182,011	-				-0.5
1,182,019	-				+0.3
1,182,232	+		RR42_RS26015	0.20	+0.3
1,182,253	-		RR42_RS26015	0.21	-1.5
1,182,265	+		RR42_RS26015	0.22	+0.5
1,182,282	-		RR42_RS26015	0.23	-0.7
1,182,310	-		RR42_RS26015	0.25	-0.2
1,182,403	+		RR42_RS26015	0.31	-3.2
1,182,430	+		RR42_RS26015	0.33	-1.5
1,182,430	+		RR42_RS26015	0.33	-0.3
1,182,430	+		RR42_RS26015	0.33	-0.4
1,182,430	+		RR42_RS26015	0.33	+1.5
1,182,430	+		RR42_RS26015	0.33	-0.4
1,182,431	-		RR42_RS26015	0.33	+0.5
1,182,730	+		RR42_RS26015	0.53	-0.4
1,182,730	+		RR42_RS26015	0.53	-0.5
1,182,865	+		RR42_RS26015	0.62	-0.5
1,182,865	+		RR42_RS26015	0.62	-0.2
1,182,866	-		RR42_RS26015	0.62	+0.6
1,182,866	-		RR42_RS26015	0.62	-0.3
1,182,866	-		RR42_RS26015	0.62	+0.1
1,183,171	+		RR42_RS26015	0.83	-2.8
1,183,171	+		RR42_RS26015	0.83	-1.1
1,183,172	-		RR42_RS26015	0.83	+0.9
1,183,172	-		RR42_RS26015	0.83	-0.3
1,183,231	+		RR42_RS26015	0.86	-0.2
1,183,232	-		RR42_RS26015	0.87	-1.0
1,183,258	-		RR42_RS26015	0.88	-1.6
1,183,306	-				+0.6
1,183,356	+				-0.6
1,183,467	+				+1.3
1,183,469	+				-0.6
1,183,470	-				-0.8
1,183,470	-				+3.6
1,183,491	+				-0.2
1,183,539	+				+0.9
1,183,613	+				-0.2
1,183,669	+				-0.5
1,183,669	+				-0.3
1,183,769	+				+0.2
1,183,910	+		RR42_RS26020	0.26	+1.6
1,183,910	+		RR42_RS26020	0.26	-0.8
1,183,911	-		RR42_RS26020	0.26	+2.2
1,183,911	-		RR42_RS26020	0.26	-0.4
1,183,911	-		RR42_RS26020	0.26	-0.2
1,184,120	+		RR42_RS26020	0.50	-1.6
1,184,121	-		RR42_RS26020	0.50	+0.6
1,184,273	-		RR42_RS26020	0.68	+0.5
1,184,331	-		RR42_RS26020	0.75	+0.5
1,184,331	-		RR42_RS26020	0.75	-0.3
1,184,331	-		RR42_RS26020	0.75	-0.6